RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 TICAM1Q8IUC6 712 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 DIS3L2Q8IYB7 885 aaKnown RBP3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 NDUFAF2Q8N183 169 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 MUC20Q8N307 709 aaPredicted RBP3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 METTL6Q8TCB7 284 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 ADAMTS16Q8TE57 1224 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 FIG4Q92562 907 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 SGCDQ92629 289 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZNF75CPQ92670 426 aaPredicted RBP3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 PABPC5Q96DU9 382 aaKnown RBP3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 GIMAP5Q96F15 307 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 TMEM19Q96HH6 336 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 FEM1CQ96JP0 617 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 CIB1Q99828 191 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 MROQ9BYG7 248 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 LRRC2Q9BYS8 371 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 CCSER1Q9C0I3 900 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 SMARCAD1Q9H4L7 1026 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 ESRP2Q9H6T0 727 aaKnown RBP3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 GAREM1Q9H706 876 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 PPP1R3EQ9H7J1 279 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 SP140LQ9H930 580 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 SCPEP1Q9HB40 452 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 S100A14Q9HCY8 104 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 NOX4Q9NPH5 578 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZDHHC18Q9NUE0 388 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 EMC3Q9P0I2 261 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 ANKMY1Q9P2S6 941 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 HMGXB4Q9UGU5 601 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 ARMCX3Q9UH62 379 aaPredicted RBP3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 AMACRQ9UHK6 382 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 ATP6V1HQ9UI12 483 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 XPO7Q9UIA9 1087 aaKnown RBP3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 DAPK2Q9UIK4 370 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 POU2F3Q9UKI9 436 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 NUP50Q9UKX7 468 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 TFR2Q9UP52 801 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 NAALADL1Q9UQQ1 740 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 WBP11Q9Y2W2 641 aaKnown RBP3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 AMDHD2Q9Y303 409 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 CRB1P82279 1406 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 PTPRUQ92729 1446 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 NRKQ7Z2Y5 1582 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 ARHGEF28Q8N1W1 1705 aaKnown RBP3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 METP08581 1390 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 PIK3C2AO00443 1686 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 FAM208AQ9UK61 1670 aaKnown RBP3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 KIF20BQ96Q89 1820 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 TMEM131LA2VDJ0 1609 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 A0A087WXM4 84 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 CLRN2A0PK11 232 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 PRR23AA6NEV1 266 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 ANTXRLA6NF34 631 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 TRIM64A6NGJ6 449 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 TRIM64BA6NI03 449 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 HNRNPCL2B2RXH8 293 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 H0YJX3 145 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZNF609O15014 1411 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 POLR1CO15160 346 aaPredicted RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 SNAP91O60641 907 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 RNASEH2AO75792 299 aaKnown RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 IDH1O75874 414 aaKnown RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 BMP10O95393 424 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 IL1BP01584 269 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 RPN1P04843 607 aaKnown RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 KRT8P05787 483 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 SP1P08047 785 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 CYC1P08574 325 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 F7P08709 466 aaPredicted RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 ABHD2P08910 425 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 LINC00271P0C7V0 271 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 G6PDP11413 515 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 ATP6V1B1P15313 513 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 ITIH1P19827 911 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 CCNE1P24864 410 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 PSMA4P25789 261 aaKnown RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 BDKRB2P30411 391 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 HOXC9P31274 260 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 KRT20P35900 424 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 EIF2S3P41091 472 aaKnown RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 SLC1A4P43007 532 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 ETV1P50549 477 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 CCR9P51686 369 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 AP2S1P53680 142 aaPredicted RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 PLTPP55058 493 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 AQP4P55087 323 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 POLR2FP61218 127 aaKnown RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 CSNK2A1P68400 391 aaPredicted RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 CDK16Q00536 496 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 GFPT1Q06210 699 aaPredicted RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 RUNX1T1Q06455 604 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 FOXM1Q08050 763 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 SCRN3Q0VDG4 424 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 TROAPQ12815 778 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZNF155Q12901 538 aaPredicted RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 GNA13Q14344 377 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZNF846Q147U1 533 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 EFTUD2Q15029 972 aaKnown RBP eCLIP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 OXA1LQ15070 435 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 TRADDQ15628 312 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms