RNA–Protein interactions for RNA: ENST00000419314.5

CCT6P3-201, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CCT6P3, Length 3,702 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P3-201ENST00000419314 ZNF542PQ5EBM4 170 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 PIP5KL1Q5T9C9 394 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 PDZD3Q86UT5 571 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 C11orf74Q86VG3 221 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 APLFQ8IW19 511 aaPredicted RBP13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 ARL10Q8N8L6 244 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 MRPL38Q96DV4 380 aaKnown RBP13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 OTUB1Q96FW1 271 aaPredicted RBP13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 MUS81Q96NY9 551 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 SLC52A3Q9NQ40 469 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 DMRT3Q9NQL9 472 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 NDUFA13Q9P0J0 144 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 C3orf18Q9UK00 162 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 GPR34Q9UPC5 381 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 CXorf51AA0A1B0GTR3 108 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 H0YIV9 168 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 TNFRSF1BP20333 461 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 AK4P27144 223 aaPredicted RBP13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 OR1E2P47887 323 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 CCR3P51677 355 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 SMU1Q2TAY7 513 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 SPATS1Q496A3 300 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 TTC23Q5W5X9 447 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 TBPL2Q6SJ96 375 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 EPHX4Q8IUS5 362 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 NAGSQ8N159 534 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 XAGE5Q8WWM1 108 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 DPEP2Q9H4A9 486 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 TANC1Q9C0D5 1861 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 H3BSA7 217 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 RASAL1O95294 804 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 KDELR2P33947 212 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 TMEM52BQ4KMG9 183 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 TRIM40Q6P9F5 258 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 ARMCX6Q7L4S7 300 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 RNF130Q86XS8 419 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 PTRH1Q86Y79 214 aaKnown RBP13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 MSRB3Q8IXL7 192 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 UTP15Q8TED0 518 aaKnown RBP13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 CPPED1Q9BRF8 314 aaPredicted RBP13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 TMEM121BQ9BXQ6 578 aaPredicted RBP13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 TOR3AQ9H497 397 aa13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 PCYT1BQ9Y5K3 369 aaPredicted RBP13.29□□□□□ -0.28
CCT6P3-201ENST00000419314 ZFC3H1O60293 1989 aaKnown RBP13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 PRAMEF33A0A0G2JMD5 474 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 M0QX08 132 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 C1QCP02747 245 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 FABP3P05413 133 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 C16orf72Q14CZ0 275 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 ANKRD34AQ69YU3 496 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 MMP21Q8N119 569 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 DNAJB8Q8NHS0 232 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 NRBF2Q96F24 287 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 HSH2DQ96JZ2 352 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 CDCA3Q99618 268 aaPredicted RBP13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 YIPF4Q9BSR8 244 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 DGCR6LQ9BY27 220 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 MRPS30Q9NP92 439 aaKnown RBP13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 RASSF1Q9NS23 344 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 SLC13A4Q9UKG4 626 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 CLCA2Q9UQC9 943 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 PCDHB11Q9Y5F2 797 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 KCNE1BA0A087WTH5 132 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 CCNDBP1O95273 360 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 CDH2P19022 906 aaPredicted RBP13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 GCNT6Q5T4J0 391 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 MTSS1LQ765P7 747 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 ZNF765Q7L2R6 523 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 PARP8Q8N3A8 854 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 C16orf78Q8WTQ4 265 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 DGCR14Q96DF8 476 aaKnown RBP13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 INSM2Q96T92 566 aaPredicted RBP13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 HDAC8Q9BY41 377 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 SMIM31A0A1B0GVY4 71 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 ERI3O43414 337 aaKnown RBP13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 SOD1P00441 154 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 HSD3B1P14060 373 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 IL7RP16871 459 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 IGFBP5P24593 272 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 HSD3B2P26439 372 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 DRD3P35462 400 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 SLC14A1Q13336 389 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 BCL7AQ4VC05 210 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 ERICH5Q6P6B1 374 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 ZNF551Q7Z340 670 aaPredicted RBP13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 PACRGLQ8N7B6 248 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 NFKBIDQ8NI38 313 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 RAB8BQ92930 207 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 TESCQ96BS2 214 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 QRFPRQ96P65 431 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 LIN28AQ9H9Z2 209 aaKnown RBP13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 ZNF282Q9UDV7 671 aaPredicted RBP13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 MAPRE3Q9UPY8 281 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 ZNF451Q9Y4E5 1061 aa13.28□□□□□ -0.28
CCT6P3-201ENST00000419314 POU2F1P14859 743 aa13.27□□□□□ -0.28
CCT6P3-201ENST00000419314 ELK4P28324 431 aa13.27□□□□□ -0.28
CCT6P3-201ENST00000419314 DGKEP52429 567 aa13.27□□□□□ -0.28
CCT6P3-201ENST00000419314 PYCR3Q53H96 274 aa13.27□□□□□ -0.28
CCT6P3-201ENST00000419314 C10orf111Q8N326 155 aa13.27□□□□□ -0.28
CCT6P3-201ENST00000419314 WDR20Q8TBZ3 569 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms