RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 LPCAT1Q8NF37 534 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 PJA1Q8NG27 643 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 OR52K2Q8NGK3 314 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 GDAP1Q8TB36 358 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 WFDC5Q8TCV5 224 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 BLOC1S5Q8TDH9 187 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 DCAKDQ8WVC6 231 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 ATP2A3Q93084 1043 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 OTUB2Q96DC9 234 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 MRPL38Q96DV4 380 aaKnown RBP3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 ATXN7L3BQ96GX2 97 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZNF419Q96HQ0 510 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 CABS1Q96KC9 395 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 PSKH2Q96QS6 385 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 NUDCD1Q96RS6 583 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 RANBP9Q96S59 729 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZNF347Q96SE7 839 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 RBBP8Q99708 897 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 CPNE1Q99829 537 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 GDF15Q99988 308 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 TMEM204Q9BSN7 226 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 TDRD1Q9BXT4 1180 aaKnown RBP3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 TM6SF2Q9BZW4 377 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 FAM107BQ9H098 131 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 MRM3Q9HC36 420 aaKnown RBP3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 SPHK2Q9NRA0 654 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 SMYD2Q9NRG4 433 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 IARS2Q9NSE4 1012 aaKnown RBP3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 ABCB8Q9NUT2 735 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 EURLQ9NYK6 297 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 IL1RAPL1Q9NZN1 696 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 PROCRQ9UNN8 238 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 CCL26Q9Y258 94 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 PCDHGB2Q9Y5G2 931 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 DOCK6Q96HP0 2047 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 A0A1W2PPM1 405 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 SRRM3A6NNA2 597 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 TNFRSF13BO14836 293 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 PFDN6O15212 129 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 TM9SF1O15321 606 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 UGT1A9O60656 530 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 SHOX2O60902 331 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 FAM155BO75949 473 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 VAPBO95292 243 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 ALDOAP04075 364 aaKnown RBP3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 MMP2P08253 660 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 ITGA2BP08514 1039 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 VIMP08670 466 aaKnown RBP3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 POLR2EP19388 210 aaKnown RBP3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 NFKBIAP25963 317 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 SERPINA4P29622 427 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 CD70P32970 193 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 ADRA1AP35348 466 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 NNMTP40261 264 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 RGRP47804 291 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 CD151P48509 253 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 KPNA2P52292 529 aaKnown RBP3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 PGGT1BP53609 377 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 LIMK2P53671 638 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 ST8SIA6P61647 398 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZXDBP98169 803 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 SULT2A1Q06520 285 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 BCL2L1Q07817 233 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 DNAJC3Q13217 504 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 FRG1Q14331 258 aaKnown RBP3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 DMC1Q14565 340 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 CYTH1Q15438 398 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZKSCAN8Q15776 578 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 ACCSLQ4AC99 568 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 INO80DQ53TQ3 878 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 HSP90AA5PQ58FG0 334 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 TNFAIP8L3Q5GJ75 292 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 FSCBQ5H9T9 825 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 ARMC12Q5T9G4 340 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 GRTP1Q5TC63 336 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZNF470Q6ECI4 717 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 C22orf39Q6P5X5 142 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 AFTPHQ6ULP2 937 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 RAPH1Q70E73 1250 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 CYS1Q717R9 158 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 NLRP9Q7RTR0 991 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 CPLX4Q7Z7G2 160 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 SRLQ86TD4 932 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 TMEM135Q86UB9 458 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 TDHQ8IZJ6 230 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 APCDD1Q8J025 514 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 NDUFAF2Q8N183 169 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 FBXL14Q8N1E6 418 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 PCDH20Q8N6Y1 951 aaKnown RBP3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 GPATCH11Q8N954 259 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 ADPRHL1Q8NDY3 354 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 VN1R2Q8NFZ6 395 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 OR52N4Q8NGI2 321 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 FIBINQ8TAL6 211 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 ITFG1Q8TB96 612 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 ARRDC2Q8TBH0 407 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 LRRC8CQ8TDW0 803 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 ACMSDQ8TDX5 336 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 WFIKKN2Q8TEU8 576 aa3.72□□□□□ -1.81
HMGB3P20-201ENST00000417997 STYXQ8WUJ0 223 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms