RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 ANKRD53Q8N9V6 530 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 ICA1LQ8NDH6 482 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 TRPV3Q8NET8 790 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 CDC26Q8NHZ8 85 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 BIRC7Q96CA5 298 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 CDX2Q99626 313 aaPredicted RBP16.09■□□□□ 0.17
SSBP3-205ENST00000417664 TMEM168Q9H0V1 697 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 PCED1AQ9H1Q7 454 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 XKR8Q9H6D3 395 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 LTB4R2Q9NPC1 389 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 GPR27Q9NS67 375 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 ANAPC2Q9UJX6 822 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 CORO2BQ9UQ03 480 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 DTNAQ9Y4J8 743 aa16.09■□□□□ 0.17
SSBP3-205ENST00000417664 A0A1W2PPC4 97 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 H0YJX3 145 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 SH3BGRLO75368 114 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 EPN2O95208 641 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 ANXA6P08133 673 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 RPSAP08865 295 aaKnown RBP16.08■□□□□ 0.17
SSBP3-205ENST00000417664 LAMP1P11279 417 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 PIM1P11309 404 aaPredicted RBP16.08■□□□□ 0.17
SSBP3-205ENST00000417664 BMP2P12643 396 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 AK4P27144 223 aaPredicted RBP16.08■□□□□ 0.17
SSBP3-205ENST00000417664 CMPK1P30085 196 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 TBCELQ5QJ74 424 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 FAM71E1Q6IPT2 247 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 DNAJC14Q6Y2X3 702 aaPredicted RBP16.08■□□□□ 0.17
SSBP3-205ENST00000417664 ERMP1Q7Z2K6 904 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 SERPINA11Q86U17 422 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 ANKRD46Q86W74 232 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 AMIGO1Q86WK6 493 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 DCP2Q8IU60 420 aaKnown RBP16.08■□□□□ 0.17
SSBP3-205ENST00000417664 DTWD1Q8N5C7 304 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 OR13H1Q8NG92 308 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 GPBAR1Q8TDU6 330 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 C16orf78Q8WTQ4 265 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 LCN9Q8WX39 176 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 FAM120BQ96EK7 910 aaKnown RBP16.08■□□□□ 0.17
SSBP3-205ENST00000417664 INPP5KQ9BT40 448 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 CHRDQ9H2X0 955 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 RPF2Q9H7B2 306 aaKnown RBP16.08■□□□□ 0.17
SSBP3-205ENST00000417664 PCDHGA2Q9Y5H1 932 aa16.08■□□□□ 0.17
SSBP3-205ENST00000417664 OR5K4A6NMS3 321 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 GSTA4O15217 222 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 OR1F1O43749 312 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 KLK1P06870 262 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 FOSL2P15408 326 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 FASP25445 335 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 AHRP35869 848 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 HSPA13P48723 471 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 TFF2Q03403 129 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 SF1Q15637 639 aaKnown RBP16.08■□□□□ 0.16
SSBP3-205ENST00000417664 LRRC36Q1X8D7 754 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 TMEM35AQ53FP2 167 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 MICU2Q8IYU8 434 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 GJD3Q8N144 294 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 OR2L3Q8NG85 312 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 RGMAQ96B86 450 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 PPWD1Q96BP3 646 aaKnown RBP16.08■□□□□ 0.16
SSBP3-205ENST00000417664 REXO5Q96IC2 774 aaKnown RBP16.08■□□□□ 0.16
SSBP3-205ENST00000417664 SPATA9Q9BWV2 254 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 GPR174Q9BXC1 333 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 GSDMCQ9BYG8 508 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 IKZF5Q9H5V7 419 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 SLC6A13Q9NSD5 602 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 SNX7Q9UNH6 387 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 AURKCQ9UQB9 309 aa16.08■□□□□ 0.16
SSBP3-205ENST00000417664 IGKV1-8A0A0C4DH67 115 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 SPTY2D1-AS1A0A0U1RR47 76 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 ARHGAP10A1A4S6 786 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 PLPP1O14494 284 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 CAPN5O15484 640 aaPredicted RBP16.07■□□□□ 0.16
SSBP3-205ENST00000417664 TBX19O60806 448 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 TBX6O95947 436 aaPredicted RBP16.07■□□□□ 0.16
SSBP3-205ENST00000417664 RETP07949 1114 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 FURINP09958 794 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 GPX2P18283 190 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 CDKN2CP42773 168 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 BLKP51451 505 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 FZD5Q13467 585 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 GTDC1Q4AE62 458 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 ERICH5Q6P6B1 374 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 SLC30A9Q6PML9 568 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 ADCK2Q7Z695 626 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 ANKFN1Q8N957 763 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 GOT1L1Q8NHS2 421 aaPredicted RBP16.07■□□□□ 0.16
SSBP3-205ENST00000417664 WDR48Q8TAF3 677 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 LRTOMTQ8WZ04 291 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 MIEF2Q96C03 454 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 PPCDCQ96CD2 204 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 ZNF764Q96H86 408 aaPredicted RBP16.07■□□□□ 0.16
SSBP3-205ENST00000417664 NRTNQ99748 197 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 TWSG1Q9GZX9 223 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 YY1AP1Q9H869 796 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 C8orf4Q9NR00 106 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 SH3BP4Q9P0V3 963 aa16.07■□□□□ 0.16
SSBP3-205ENST00000417664 ZNF624Q9P2J8 865 aaPredicted RBP16.07■□□□□ 0.16
SSBP3-205ENST00000417664 ZNF282Q9UDV7 671 aaPredicted RBP16.07■□□□□ 0.16
SSBP3-205ENST00000417664 CLIC1O00299 241 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms