RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 CPAMD8Q8IZJ3 1885 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 A0A1B0GTL3 188 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 NCF1BA6NI72 391 aaPredicted RBP17.06■□□□□ 0.32
VCP-202ENST00000417448 NCF1CA8MVU1 366 aaPredicted RBP17.06■□□□□ 0.32
VCP-202ENST00000417448 SLC16A5O15375 505 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 ZSCAN9O15535 394 aaPredicted RBP17.06■□□□□ 0.32
VCP-202ENST00000417448 UNC5CO95185 931 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 CD63P08962 238 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 ERGP11308 486 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 NCF1P14598 390 aaPredicted RBP17.06■□□□□ 0.32
VCP-202ENST00000417448 CD1DP15813 335 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 RPA3P35244 121 aaPredicted RBP17.06■□□□□ 0.32
VCP-202ENST00000417448 KIR3DL1P43629 444 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 KCNC1P48547 511 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 NAE1Q13564 534 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 LRRC8EQ6NSJ5 796 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 FIGLAQ6QHK4 219 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 AGTRAPQ6RW13 159 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 KIRREL2Q6UWL6 708 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 ZNF655Q8N720 491 aaPredicted RBP17.06■□□□□ 0.32
VCP-202ENST00000417448 KCTD4Q8WVF5 259 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 SMPDL3AQ92484 453 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 EXT2Q93063 718 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 ZBTB9Q96C00 473 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 PYCR2Q96C36 320 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 NXNL1Q96CM4 212 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 C14orf79Q96F83 325 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 MESP1Q9BRJ9 268 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 RAB11FIP5Q9BXF6 653 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 PARD6BQ9BYG5 372 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 LHPPQ9H008 270 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 POPDC3Q9HBV1 291 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 SNX15Q9NRS6 342 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 ARL15Q9NXU5 204 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 TAC3Q9UHF0 121 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 SCN3AQ9NY46 2000 aa17.06■□□□□ 0.32
VCP-202ENST00000417448 TRIM49D1C9J1S8 452 aa17.05■□□□□ 0.32
VCP-202ENST00000417448 MAP3K7O43318 606 aa17.05■□□□□ 0.32
VCP-202ENST00000417448 ALDOAP04075 364 aaKnown RBP17.05■□□□□ 0.32
VCP-202ENST00000417448 C2P06681 752 aa17.05■□□□□ 0.32
VCP-202ENST00000417448 ABHD2P08910 425 aa17.05■□□□□ 0.32
VCP-202ENST00000417448 MST1P26927 711 aa17.05■□□□□ 0.32
VCP-202ENST00000417448 MFAP5Q13361 173 aa17.05■□□□□ 0.32
VCP-202ENST00000417448 PPP1R3AQ16821 1122 aa17.05■□□□□ 0.32
VCP-202ENST00000417448 THEMIS2Q5TEJ8 643 aa17.05■□□□□ 0.32
VCP-202ENST00000417448 IRAK1BP1Q5VVH5 260 aa17.05■□□□□ 0.32
VCP-202ENST00000417448 ISLR2Q6UXK2 745 aa17.05■□□□□ 0.32
VCP-202ENST00000417448 OR2L3Q8NG85 312 aa17.05■□□□□ 0.32
VCP-202ENST00000417448 HMGCLL1Q8TB92 370 aa17.05■□□□□ 0.32
VCP-202ENST00000417448 NACC2Q96BF6 587 aa17.05■□□□□ 0.32
VCP-202ENST00000417448 THOC3Q96J01 351 aaKnown RBP17.05■□□□□ 0.32
VCP-202ENST00000417448 CCDC138Q96M89 665 aa17.05■□□□□ 0.32
VCP-202ENST00000417448 SPSB2Q99619 263 aa17.05■□□□□ 0.32
VCP-202ENST00000417448 VPS11Q9H270 941 aa17.05■□□□□ 0.32
VCP-202ENST00000417448 ZNF358Q9NW07 568 aa17.05■□□□□ 0.32
VCP-202ENST00000417448 IKBKGQ9Y6K9 419 aa17.05■□□□□ 0.32
VCP-202ENST00000417448 SMIM23A6NLE4 172 aa17.04■□□□□ 0.32
VCP-202ENST00000417448 HIST1H2AGP0C0S8 130 aaPredicted RBP17.04■□□□□ 0.32
VCP-202ENST00000417448 HIST1H2ADP20671 130 aa17.04■□□□□ 0.32
VCP-202ENST00000417448 TYK2P29597 1187 aa17.04■□□□□ 0.32
VCP-202ENST00000417448 TBPL1P62380 186 aa17.04■□□□□ 0.32
VCP-202ENST00000417448 SP140Q13342 867 aa17.04■□□□□ 0.32
VCP-202ENST00000417448 XKRXQ6PP77 449 aa17.04■□□□□ 0.32
VCP-202ENST00000417448 PLD6Q8N2A8 252 aaKnown RBP17.04■□□□□ 0.32
VCP-202ENST00000417448 EIF1ADQ8N9N8 165 aaKnown RBP17.04■□□□□ 0.32
VCP-202ENST00000417448 OR2W6PQ8NHA6 318 aa17.04■□□□□ 0.32
VCP-202ENST00000417448 N4BP2L2Q92802 583 aaPredicted RBP17.04■□□□□ 0.32
VCP-202ENST00000417448 HIST1H2AHQ96KK5 128 aa17.04■□□□□ 0.32
VCP-202ENST00000417448 UBXN10Q96LJ8 280 aa17.04■□□□□ 0.32
VCP-202ENST00000417448 HIST1H2AJQ99878 128 aa17.04■□□□□ 0.32
VCP-202ENST00000417448 H2AFJQ9BTM1 129 aa17.04■□□□□ 0.32
VCP-202ENST00000417448 DPH7Q9BTV6 452 aa17.04■□□□□ 0.32
VCP-202ENST00000417448 DERL2Q9GZP9 239 aa17.04■□□□□ 0.32
VCP-202ENST00000417448 ALG9Q9H6U8 611 aa17.04■□□□□ 0.32
VCP-202ENST00000417448 RRAGDQ9NQL2 400 aaPredicted RBP17.04■□□□□ 0.32
VCP-202ENST00000417448 TXLNGQ9NUQ3 528 aa17.04■□□□□ 0.32
VCP-202ENST00000417448 TBK1Q9UHD2 729 aa17.04■□□□□ 0.32
VCP-202ENST00000417448 SCN2AQ99250 2005 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 A0A096LPK6 155 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 IGKV1-8A0A0C4DH67 115 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 CTSVO60911 334 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 WISP2O76076 250 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 TFEBP19484 476 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 CRABP2P29373 138 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 HSD17B3P37058 310 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 SLCO1A2P46721 670 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 GCGRP47871 477 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 TLE4Q04727 773 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 ARHGAP19Q14CB8 494 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 ICE2Q659A1 982 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 MTFR2Q6P444 385 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 SHISA6Q6ZSJ9 500 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 FRA10AC1Q70Z53 315 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 PLD3Q8IV08 490 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 CENPLQ8N0S6 344 aaPredicted RBP17.03■□□□□ 0.32
VCP-202ENST00000417448 DNAJC22Q8N4W6 341 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 AENQ8WTP8 325 aaKnown RBP17.03■□□□□ 0.32
VCP-202ENST00000417448 ESAMQ96AP7 390 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 SLC22A18Q96BI1 424 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 LMF1Q96S06 567 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms