RNA–Protein interactions for RNA: ENST00000415461.2

CTTN-205, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-205ENST00000415461 PHACTR1Q9C0D0 580 aa19.03■□□□□ 0.64
CTTN-205ENST00000415461 ZNF700Q9H0M5 742 aa19.03■□□□□ 0.64
CTTN-205ENST00000415461 PELI2Q9HAT8 420 aa19.03■□□□□ 0.64
CTTN-205ENST00000415461 ASF1BQ9NVP2 202 aa19.03■□□□□ 0.64
CTTN-205ENST00000415461 SHANK1Q9Y566 2161 aa19.03■□□□□ 0.64
CTTN-205ENST00000415461 IGHV3-20A0A0C4DH32 117 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 PCDH17O14917 1159 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 WDR47O94967 919 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 B3GALT4O96024 378 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 SERPINA7P05543 415 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 VARSP26640 1264 aaKnown RBP19.02■□□□□ 0.64
CTTN-205ENST00000415461 SOX11P35716 441 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 GDF5P43026 501 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 SLC6A12P48065 614 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 HNMTP50135 292 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 ILF2Q12905 390 aaKnown RBP19.02■□□□□ 0.64
CTTN-205ENST00000415461 HERC3Q15034 1050 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 KBTBD12Q3ZCT8 623 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 DEFB134Q4QY38 66 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 CRB2Q5IJ48 1285 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 NXPE4Q6UWF7 544 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 TBC1D19Q8N5T2 526 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 SIRT6Q8N6T7 355 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 DNAJB14Q8TBM8 379 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 PSMF1Q92530 271 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 RHBDF1Q96CC6 855 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 TSPAN17Q96FV3 270 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 C16orf45Q96MC5 204 aaPredicted RBP19.02■□□□□ 0.64
CTTN-205ENST00000415461 SLC29A3Q9BZD2 475 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 PTGFRNQ9P2B2 879 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 ZFP69BQ9UJL9 534 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 NTNG1Q9Y2I2 539 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 KCNE2Q9Y6J6 123 aa19.02■□□□□ 0.64
CTTN-205ENST00000415461 DOPEY2Q9Y3R5 2298 aa19.02■□□□□ 0.63
CTTN-205ENST00000415461 GALR3O60755 368 aaPredicted RBP19.01■□□□□ 0.63
CTTN-205ENST00000415461 CDC123O75794 336 aaPredicted RBP19.01■□□□□ 0.63
CTTN-205ENST00000415461 FAM155BO75949 473 aa19.01■□□□□ 0.63
CTTN-205ENST00000415461 GSTA2P09210 222 aa19.01■□□□□ 0.63
CTTN-205ENST00000415461 ZNF888P0CJ79 500 aaPredicted RBP19.01■□□□□ 0.63
CTTN-205ENST00000415461 CCDC166P0CW27 439 aa19.01■□□□□ 0.63
CTTN-205ENST00000415461 STMN1P16949 149 aa19.01■□□□□ 0.63
CTTN-205ENST00000415461 GMPRP36959 345 aa19.01■□□□□ 0.63
CTTN-205ENST00000415461 MAGEA4P43358 317 aa19.01■□□□□ 0.63
CTTN-205ENST00000415461 GLRBP48167 497 aa19.01■□□□□ 0.63
CTTN-205ENST00000415461 OLR1P78380 273 aa19.01■□□□□ 0.63
CTTN-205ENST00000415461 SLC7A5Q01650 507 aa19.01■□□□□ 0.63
CTTN-205ENST00000415461 CKAP4Q07065 602 aaKnown RBP19.01■□□□□ 0.63
CTTN-205ENST00000415461 RGS1Q08116 209 aa19.01■□□□□ 0.63
CTTN-205ENST00000415461 EFTUD2Q15029 972 aaKnown RBP eCLIP19.01■□□□□ 0.633e-7■■■■■ 27.4
CTTN-205ENST00000415461 NR6A1Q15406 480 aa19.01■□□□□ 0.63
CTTN-205ENST00000415461 CYS1Q717R9 158 aa19.01■□□□□ 0.63
CTTN-205ENST00000415461 PPM1NQ8N819 430 aa19.01■□□□□ 0.63
CTTN-205ENST00000415461 ANKRD53Q8N9V6 530 aa19.01■□□□□ 0.63
CTTN-205ENST00000415461 NT5CQ8TCD5 201 aa19.01■□□□□ 0.63
CTTN-205ENST00000415461 METTL21AQ8WXB1 218 aa19.01■□□□□ 0.63
CTTN-205ENST00000415461 PEX11GQ96HA9 241 aa19.01■□□□□ 0.63
CTTN-205ENST00000415461 AIF1LQ9BQI0 150 aa19.01■□□□□ 0.63
CTTN-205ENST00000415461 LRRC4CQ9HCJ2 640 aa19.01■□□□□ 0.63
CTTN-205ENST00000415461 DNAJB6O75190 326 aa19■□□□□ 0.63
CTTN-205ENST00000415461 SEC24DO94855 1032 aaPredicted RBP19■□□□□ 0.63
CTTN-205ENST00000415461 ITGAMP11215 1152 aa19■□□□□ 0.63
CTTN-205ENST00000415461 CD1DP15813 335 aa19■□□□□ 0.63
CTTN-205ENST00000415461 ALOX12P18054 663 aa19■□□□□ 0.63
CTTN-205ENST00000415461 AHRP35869 848 aa19■□□□□ 0.63
CTTN-205ENST00000415461 ZNF169Q14929 603 aaPredicted RBP19■□□□□ 0.63
CTTN-205ENST00000415461 RBBP5Q15291 538 aaKnown RBP19■□□□□ 0.63
CTTN-205ENST00000415461 TGFBIQ15582 683 aa19■□□□□ 0.63
CTTN-205ENST00000415461 OR4D1Q15615 310 aa19■□□□□ 0.63
CTTN-205ENST00000415461 ZKSCAN8Q15776 578 aaPredicted RBP19■□□□□ 0.63
CTTN-205ENST00000415461 FBXO48Q5FWF7 155 aa19■□□□□ 0.63
CTTN-205ENST00000415461 C8orf74Q6P047 294 aa19■□□□□ 0.63
CTTN-205ENST00000415461 ANKRD37Q7Z713 158 aa19■□□□□ 0.63
CTTN-205ENST00000415461 IMMP1LQ96LU5 166 aa19■□□□□ 0.63
CTTN-205ENST00000415461 LMF1Q96S06 567 aa19■□□□□ 0.63
CTTN-205ENST00000415461 CYTH2Q99418 400 aa19■□□□□ 0.63
CTTN-205ENST00000415461 TMEM79Q9BSE2 394 aa19■□□□□ 0.63
CTTN-205ENST00000415461 TUBB6Q9BUF5 446 aa19■□□□□ 0.63
CTTN-205ENST00000415461 WWOXQ9NZC7 414 aa19■□□□□ 0.63
CTTN-205ENST00000415461 COPG1Q9Y678 874 aaKnown RBP19■□□□□ 0.63
CTTN-205ENST00000415461 DOCK10Q96BY6 2186 aa19■□□□□ 0.63
CTTN-205ENST00000415461 UQCRHP07919 91 aa18.99■□□□□ 0.63
CTTN-205ENST00000415461 CYC1P08574 325 aa18.99■□□□□ 0.63
CTTN-205ENST00000415461 STX2P32856 288 aa18.99■□□□□ 0.63
CTTN-205ENST00000415461 HNF4AP41235 474 aa18.99■□□□□ 0.63
CTTN-205ENST00000415461 TSFMP43897 325 aaKnown RBP18.99■□□□□ 0.63
CTTN-205ENST00000415461 RAB10P61026 200 aa18.99■□□□□ 0.63
CTTN-205ENST00000415461 HYAL2Q12891 473 aa18.99■□□□□ 0.63
CTTN-205ENST00000415461 CDC16Q13042 620 aa18.99■□□□□ 0.63
CTTN-205ENST00000415461 SLMAPQ14BN4 828 aa18.99■□□□□ 0.63
CTTN-205ENST00000415461 TLR1Q15399 786 aa18.99■□□□□ 0.63
CTTN-205ENST00000415461 B3GNTL1Q67FW5 361 aaPredicted RBP18.99■□□□□ 0.63
CTTN-205ENST00000415461 RIPOR1Q6ZS17 1223 aa18.99■□□□□ 0.63
CTTN-205ENST00000415461 ABHD13Q7L211 337 aa18.99■□□□□ 0.63
CTTN-205ENST00000415461 CPEB2Q7Z5Q1 589 aaKnown RBP18.99■□□□□ 0.63
CTTN-205ENST00000415461 GPSM1Q86YR5 675 aa18.99■□□□□ 0.63
CTTN-205ENST00000415461 KLHDC8AQ8IYD2 350 aa18.99■□□□□ 0.63
CTTN-205ENST00000415461 CATSPER1Q8NEC5 780 aa18.99■□□□□ 0.63
CTTN-205ENST00000415461 UTP15Q8TED0 518 aaKnown RBP18.99■□□□□ 0.63
CTTN-205ENST00000415461 FBF1Q8TES7 1133 aa18.99■□□□□ 0.63
CTTN-205ENST00000415461 TSLPQ969D9 159 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms