RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 B3GNTL1Q67FW5 361 aaPredicted RBP4.42□□□□□ -1.7
PTPRK-210ENST00000415055 RWDD4Q6NW29 188 aaKnown RBP4.42□□□□□ -1.7
PTPRK-210ENST00000415055 ACSM6Q6P461 480 aa4.42□□□□□ -1.7
PTPRK-210ENST00000415055 DOK6Q6PKX4 331 aa4.42□□□□□ -1.7
PTPRK-210ENST00000415055 RHOUQ7L0Q8 258 aa4.42□□□□□ -1.7
PTPRK-210ENST00000415055 NAGSQ8N159 534 aa4.42□□□□□ -1.7
PTPRK-210ENST00000415055 RBMXL3Q8N7X1 1067 aaKnown RBP4.42□□□□□ -1.7
PTPRK-210ENST00000415055 NKAIN3Q8N8D7 197 aa4.42□□□□□ -1.7
PTPRK-210ENST00000415055 OR52L2PQ8NGH6 319 aa4.42□□□□□ -1.7
PTPRK-210ENST00000415055 ISG20Q96AZ6 181 aaKnown RBP4.42□□□□□ -1.7
PTPRK-210ENST00000415055 OR6C1Q96RD1 312 aa4.42□□□□□ -1.7
PTPRK-210ENST00000415055 RANBP9Q96S59 729 aa4.42□□□□□ -1.7
PTPRK-210ENST00000415055 MECRQ9BV79 373 aa4.42□□□□□ -1.7
PTPRK-210ENST00000415055 ALG8Q9BVK2 526 aa4.42□□□□□ -1.7
PTPRK-210ENST00000415055 CINPQ9BW66 212 aaPredicted RBP4.42□□□□□ -1.7
PTPRK-210ENST00000415055 AKIP1Q9NQ31 210 aa4.42□□□□□ -1.7
PTPRK-210ENST00000415055 EIF2B3Q9NR50 452 aaKnown RBP4.42□□□□□ -1.7
PTPRK-210ENST00000415055 PHPT1Q9NRX4 125 aaPredicted RBP4.42□□□□□ -1.7
PTPRK-210ENST00000415055 HAUS2Q9NVX0 235 aa4.42□□□□□ -1.7
PTPRK-210ENST00000415055 GPR83Q9NYM4 423 aa4.42□□□□□ -1.7
PTPRK-210ENST00000415055 HSF4Q9ULV5 492 aa4.42□□□□□ -1.7
PTPRK-210ENST00000415055 COPG1Q9Y678 874 aaKnown RBP4.42□□□□□ -1.7
PTPRK-210ENST00000415055 TRGV11A0A075B6L2 103 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 FAM170AA1A519 330 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 UNC119BA6NIH7 251 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 PEX12O00623 359 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 CETN3O15182 167 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 INSIG1O15503 277 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 PROM1O43490 865 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 MED7O43513 233 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 KLRC4O43908 158 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 HSF2BPO75031 334 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 RECQL5O94762 991 aaPredicted RBP4.41□□□□□ -1.7
PTPRK-210ENST00000415055 TMCC1O94876 653 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 TJP3O95049 919 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 NXPH3O95157 252 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 METTL18O95568 372 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 PLEKP08567 350 aaPredicted RBP4.41□□□□□ -1.7
PTPRK-210ENST00000415055 UBL4AP11441 157 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 IGFBP2P18065 325 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 PTPN4P29074 926 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 PTGER4P35408 488 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 USP8P40818 1118 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 ME1P48163 572 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 SULT1E1P49888 294 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 RPL15P61313 204 aaKnown RBP4.41□□□□□ -1.7
PTPRK-210ENST00000415055 DEUP1Q05D60 604 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 NR1D2Q14995 579 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 RABEP1Q15276 862 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 EFHC1Q5JVL4 640 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 BRMS1LQ5PSV4 323 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 LYPLAL1Q5VWZ2 237 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 SLC9A4Q6AI14 798 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 WDR74Q6RFH5 385 aaPredicted RBP4.41□□□□□ -1.7
PTPRK-210ENST00000415055 SHC4Q6S5L8 630 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 H1FNTQ75WM6 255 aaPredicted RBP4.41□□□□□ -1.7
PTPRK-210ENST00000415055 MARK2Q7KZI7 788 aaKnown RBP4.41□□□□□ -1.7
PTPRK-210ENST00000415055 TAOK1Q7L7X3 1001 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 ARHGAP22Q7Z5H3 698 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 CPLX4Q7Z7G2 160 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 CAND1Q86VP6 1230 aaKnown RBP4.41□□□□□ -1.7
PTPRK-210ENST00000415055 NRROSQ86YC3 692 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 TTC30BQ8N4P2 665 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 ADPRHL1Q8NDY3 354 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 FDCSPQ8NFU4 85 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 GPR150Q8NGU9 434 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 RFWD2Q8NHY2 731 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 SLC37A2Q8TED4 501 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 NPIPB3Q92617 1050 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 ARHGEF2Q92974 986 aaKnown RBP4.41□□□□□ -1.7
PTPRK-210ENST00000415055 NACC2Q96BF6 587 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 CCDC34Q96HJ3 373 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 NUDT9Q9BW91 350 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 ZYG11BQ9C0D3 744 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 MUC13Q9H3R2 512 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 STN1Q9H668 368 aaKnown RBP4.41□□□□□ -1.7
PTPRK-210ENST00000415055 PLSCR4Q9NRQ2 329 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 AGPAT4Q9NRZ5 378 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 PIGVQ9NUD9 493 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 ARHGEF38Q9NXL2 777 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 TRAF3IP3Q9Y228 551 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 ATRQ13535 2644 aa4.41□□□□□ -1.7
PTPRK-210ENST00000415055 NSD1Q96L73 2696 aaPredicted RBP4.4□□□□□ -1.7
PTPRK-210ENST00000415055 C21orf140B9A014 251 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 TEX22C9J3V5 150 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 PMPCBO75439 489 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 DAB1O75553 588 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 SPAG6O75602 509 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 HEXIM1O94992 359 aaKnown RBP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 CD160O95971 181 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 NUDT3O95989 172 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 MT-ND3P03897 115 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 ALDOAP04075 364 aaKnown RBP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 AMD1P17707 334 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 FBLP22087 321 aaKnown RBP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 NR4A1P22736 598 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 GATA3P23771 443 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 ITGA3P26006 1051 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 ZFP36P26651 326 aaKnown RBP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 DUSP1P28562 367 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms