RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 SMC6Q96SB8 1091 aa13.92□□□□□ -0.18
LIMS1-206ENST00000414829 C1QTNF3Q9BXJ4 246 aa13.92□□□□□ -0.18
LIMS1-206ENST00000414829 ERVK-6Q9BXR3 956 aa13.92□□□□□ -0.18
LIMS1-206ENST00000414829 ZNF358Q9NW07 568 aa13.92□□□□□ -0.18
LIMS1-206ENST00000414829 PTRH2Q9Y3E5 179 aaKnown RBP13.92□□□□□ -0.18
LIMS1-206ENST00000414829 TSC22D4Q9Y3Q8 395 aa13.92□□□□□ -0.18
LIMS1-206ENST00000414829 PKD1L2Q7Z442 2459 aa13.92□□□□□ -0.18
LIMS1-206ENST00000414829 IGLV3-12A0A075B6K2 115 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 H3BQF6 201 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 RGS16O15492 202 aaPredicted RBP13.91□□□□□ -0.18
LIMS1-206ENST00000414829 LCMT2O60294 686 aaKnown RBP13.91□□□□□ -0.18
LIMS1-206ENST00000414829 WFS1O76024 890 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 MLYCDO95822 493 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 CAPN1P07384 714 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 RPS17P08708 135 aaKnown RBP13.91□□□□□ -0.18
LIMS1-206ENST00000414829 PRKAR1AP10644 381 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 MYL2P10916 166 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 ALOX12P18054 663 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 F8A1P23610 371 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 CCNG1P51959 295 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 CYP4F2P78329 520 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 ASPHQ12797 758 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 SRSF6Q13247 344 aaKnown RBP13.91□□□□□ -0.18
LIMS1-206ENST00000414829 SSPNQ14714 243 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 TMEM35AQ53FP2 167 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 C16orf46Q6P387 395 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 BORAQ6PGQ7 559 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 LRIG3Q6UXM1 1119 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 GOLGA7Q7Z5G4 137 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 ANKRD53Q8N9V6 530 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 CCDC63Q8NA47 563 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 ZNF740Q8NDX6 193 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 OR2W6PQ8NHA6 318 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 ADAMTS18Q8TE60 1221 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 SREK1Q8WXA9 508 aaKnown RBP13.91□□□□□ -0.18
LIMS1-206ENST00000414829 CCT6BQ92526 530 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 GAL3ST3Q96A11 431 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 MIEF2Q96C03 454 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 RNF31Q96EP0 1072 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 WBP1Q96G27 269 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 APOPT1Q96IL0 206 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 RUFY1Q96T51 708 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 TGIF2Q9GZN2 237 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 SLC6A16Q9GZN6 736 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 ROGDIQ9GZN7 287 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 RHBGQ9H310 441 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 IPPKQ9H8X2 491 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 SEMA3GQ9NS98 782 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 ARGLU1Q9NWB6 273 aaPredicted RBP13.91□□□□□ -0.18
LIMS1-206ENST00000414829 TMEM216Q9P0N5 145 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 TRPC4Q9UBN4 977 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 PCTPQ9UKL6 214 aa13.91□□□□□ -0.18
LIMS1-206ENST00000414829 G3BP2Q9UN86 482 aaKnown RBP13.91□□□□□ -0.18
LIMS1-206ENST00000414829 A0A0A6YYC8 382 aaPredicted RBP13.9□□□□□ -0.18
LIMS1-206ENST00000414829 A0A1W2PPM1 405 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 SYNDIG1LA6NDD5 238 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 GOLGA6L10A6NI86 522 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 I3L1I5 382 aaPredicted RBP13.9□□□□□ -0.18
LIMS1-206ENST00000414829 PEX12O00623 359 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 SIX3O95343 332 aaPredicted RBP13.9□□□□□ -0.18
LIMS1-206ENST00000414829 CLDN9O95484 217 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 SFTPCP11686 197 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 EPORP19235 508 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 WT1P19544 449 aaPredicted RBP13.9□□□□□ -0.18
LIMS1-206ENST00000414829 PIK3CBP42338 1070 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 OR1D4P47884 311 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 PRKAA2P54646 552 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 RRADP55042 308 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 SLC18A2Q05940 514 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 RCN2Q14257 317 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 ERV3-1Q14264 604 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 SLC9A5Q14940 896 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 NKG7Q16617 165 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 GGTA1PQ4G0N0 100 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 TRIM40Q6P9F5 258 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 ZYG11AQ6WRX3 759 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 COX15Q7KZN9 410 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 TRABD2AQ86V40 505 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 LAS2Q8IYD9 372 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 AFAP1L2Q8N4X5 818 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 L3MBTL4Q8NA19 623 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 LSM14AQ8ND56 463 aaKnown RBP13.9□□□□□ -0.18
LIMS1-206ENST00000414829 ZCCHC10Q8TBK6 192 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 APOBEC4Q8WW27 367 aaKnown RBP13.9□□□□□ -0.18
LIMS1-206ENST00000414829 FAR2Q96K12 515 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 ARHGAP9Q9BRR9 750 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 NTMT1Q9BV86 223 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 SPNS1Q9H2V7 528 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 AKIRIN1Q9H9L7 192 aaPredicted RBP13.9□□□□□ -0.18
LIMS1-206ENST00000414829 CTSFQ9UBX1 484 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 MAN2B2Q9Y2E5 1009 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 ASB1Q9Y576 335 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 MRPS18BQ9Y676 258 aaKnown RBP13.9□□□□□ -0.18
LIMS1-206ENST00000414829 MAU2Q9Y6X3 613 aa13.9□□□□□ -0.18
LIMS1-206ENST00000414829 CDC14CA4D256 554 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 VSTM2BA6NLU5 285 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 H0YIV9 168 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 FOXS1O43638 330 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 KLHL41O60662 606 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 KLF7O75840 302 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms