RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 DHFR2Q86XF0 187 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 LINC01555Q8NAE3 123 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 OR52B6Q8NGF0 335 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 OR2T11Q8NH01 316 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 BAHD1Q8TBE0 780 aaPredicted RBP9.56□□□□□ -0.88
DDB1-202ENST00000414411 SH3KBP1Q96B97 665 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 CCT7Q99832 543 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 IL1RL2Q9HB29 575 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 PFDN4Q9NQP4 134 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 GID8Q9NWU2 228 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 SPATA7Q9P0W8 599 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 GMPR2Q9P2T1 348 aaKnown RBP9.56□□□□□ -0.88
DDB1-202ENST00000414411 AP4B1Q9Y6B7 739 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 SNRNP200O75643 2136 aaKnown RBP9.56□□□□□ -0.88
DDB1-202ENST00000414411 A0A1W2PP18 115 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 LILRA5A6NI73 299 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 PRICKLE3O43900 615 aaPredicted RBP9.56□□□□□ -0.88
DDB1-202ENST00000414411 OR4F21O95013 312 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 STAMBPO95630 424 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 PNLIPP16233 465 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 ZNF26P17031 533 aaPredicted RBP9.56□□□□□ -0.88
DDB1-202ENST00000414411 SLC6A2P23975 617 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 PKLRP30613 574 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 HSD17B2P37059 387 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 GPR3P46089 330 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 ZFP36L2P47974 494 aaKnown RBP9.56□□□□□ -0.88
DDB1-202ENST00000414411 SLC6A12P48065 614 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 PNLIPRP1P54315 467 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 ERVPABLB-1P60509 514 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 ERVK-8P63133 956 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 PCBP2Q15366 365 aaKnown RBP eCLIP9.56□□□□□ -0.88
DDB1-202ENST00000414411 NR0B2Q15466 257 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 C18orf21Q32NC0 220 aaPredicted RBP9.56□□□□□ -0.88
DDB1-202ENST00000414411 STPG1Q5TH74 334 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 AMIGO1Q86WK6 493 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 SLC15A3Q8IY34 581 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 KLHDC8AQ8IYD2 350 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 ADGRF3Q8IZF5 1079 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 DCBLD1Q8N8Z6 715 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 LMNTD1Q8N9Z9 388 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 OR4E2Q8NGC2 313 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 OR6C4Q8NGE1 309 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 OR2L8Q8NGY9 312 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 OR56A3Q8NH54 315 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 RHBDD1Q8TEB9 315 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 LCN9Q8WX39 176 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 ATL1Q8WXF7 558 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 EME1Q96AY2 570 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 LRRC58Q96CX6 371 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 SLC45A3Q96JT2 553 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 TEX37Q96LM6 180 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 IL17FQ96PD4 163 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 TMEM79Q9BSE2 394 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.56□□□□□ -0.88
DDB1-202ENST00000414411 XKR8Q9H6D3 395 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 INTS7Q9NVH2 962 aaKnown RBP9.56□□□□□ -0.88
DDB1-202ENST00000414411 RIC8BQ9NVN3 520 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 OR6C2Q9NZP2 312 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 HEATR5BQ9P2D3 2071 aa9.56□□□□□ -0.88
DDB1-202ENST00000414411 A0A1W2PPV9 198 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 ASPDHA6ND91 283 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 H0YJX3 145 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 BTN3A3O00478 584 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 B4GAT1O43505 415 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 KDM1AO60341 852 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 SHMT2P34897 504 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 PEX19P40855 299 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 LIMK1P53667 647 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 EPHA4P54764 986 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 KCNK10P57789 538 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 BNIP2Q12982 314 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 CAPRIN1Q14444 709 aaKnown RBP9.55□□□□□ -0.88
DDB1-202ENST00000414411 PTCHD3Q3KNS1 767 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 INAVAQ3KP66 663 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 SPATS1Q496A3 300 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 LIN52Q52LA3 116 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 PDCD4Q53EL6 469 aaKnown RBP9.55□□□□□ -0.88
DDB1-202ENST00000414411 TMEM164Q5U3C3 297 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 LETMD1Q6P1Q0 360 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 METTL2BQ6P1Q9 378 aaKnown RBP9.55□□□□□ -0.88
DDB1-202ENST00000414411 SCIMPQ6UWF3 145 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 ZNF761Q86XN6 746 aaPredicted RBP9.55□□□□□ -0.88
DDB1-202ENST00000414411 NAXDQ8IW45 347 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 TCAIMQ8N3R3 496 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 GALNT4Q8N4A0 578 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 CDYL2Q8N8U2 506 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 SETD7Q8WTS6 366 aaKnown RBP9.55□□□□□ -0.88
DDB1-202ENST00000414411 UBTD2Q8WUN7 234 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 JPH3Q8WXH2 748 aaPredicted RBP9.55□□□□□ -0.88
DDB1-202ENST00000414411 LRTOMTQ8WZ04 291 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 ZUFSPQ96AP4 578 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 TSC22D3Q99576 134 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 EGFL8Q99944 293 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 EFHD1Q9BUP0 239 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 SGPP1Q9BX95 441 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 RAB11FIP5Q9BXF6 653 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 CD244Q9BZW8 370 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 ATG10Q9H0Y0 220 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 SRMSQ9H3Y6 488 aa9.55□□□□□ -0.88
DDB1-202ENST00000414411 CMTM6Q9NX76 183 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms