RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 CRTC2Q53ET0 693 aaPredicted RBP15.67■□□□□ 0.1
LINC00398-201ENST00000414407 UNC50Q53HI1 259 aa15.67■□□□□ 0.1
LINC00398-201ENST00000414407 LCN10Q6JVE6 187 aa15.67■□□□□ 0.1
LINC00398-201ENST00000414407 FAM198BQ6UWH4 519 aa15.67■□□□□ 0.1
LINC00398-201ENST00000414407 CCDC81Q6ZN84 652 aa15.67■□□□□ 0.1
LINC00398-201ENST00000414407 VASH2Q86V25 355 aa15.67■□□□□ 0.1
LINC00398-201ENST00000414407 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.67■□□□□ 0.1
LINC00398-201ENST00000414407 AFAP1L2Q8N4X5 818 aa15.67■□□□□ 0.1
LINC00398-201ENST00000414407 CCDC63Q8NA47 563 aa15.67■□□□□ 0.1
LINC00398-201ENST00000414407 KCT2Q8NC54 265 aa15.67■□□□□ 0.1
LINC00398-201ENST00000414407 TCP10LQ8TDR4 215 aa15.67■□□□□ 0.1
LINC00398-201ENST00000414407 PPP4R1Q8TF05 950 aa15.67■□□□□ 0.1
LINC00398-201ENST00000414407 SNRNP27Q8WVK2 155 aaKnown RBP15.67■□□□□ 0.1
LINC00398-201ENST00000414407 ATP6V1E2Q96A05 226 aa15.67■□□□□ 0.1
LINC00398-201ENST00000414407 REPS1Q96D71 796 aa15.67■□□□□ 0.1
LINC00398-201ENST00000414407 NSUN5Q96P11 429 aaKnown RBP15.67■□□□□ 0.1
LINC00398-201ENST00000414407 TMEM237Q96Q45 408 aa15.67■□□□□ 0.1
LINC00398-201ENST00000414407 SLC26A1Q9H2B4 701 aa15.67■□□□□ 0.1
LINC00398-201ENST00000414407 CENPHQ9H3R5 247 aa15.67■□□□□ 0.1
LINC00398-201ENST00000414407 ZNF304Q9HCX3 659 aa15.67■□□□□ 0.1
LINC00398-201ENST00000414407 SLC22A11Q9NSA0 550 aa15.67■□□□□ 0.1
LINC00398-201ENST00000414407 OXSMQ9NWU1 459 aa15.67■□□□□ 0.1
LINC00398-201ENST00000414407 IFT80Q9P2H3 777 aaPredicted RBP15.67■□□□□ 0.1
LINC00398-201ENST00000414407 FARSAQ9Y285 508 aaKnown RBP15.67■□□□□ 0.1
LINC00398-201ENST00000414407 H0YIG0 161 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 EFSO43281 561 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 FOXS1O43638 330 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 SPAG7O75391 227 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 SUPT7LO94864 414 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 NSA2O95478 260 aaKnown RBP15.66■□□□□ 0.1
LINC00398-201ENST00000414407 MLYCDO95822 493 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 F8A1P23610 371 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 PTPN4P29074 926 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 AVPR1BP47901 424 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 STXBP1P61764 594 aaKnown RBP15.66■□□□□ 0.1
LINC00398-201ENST00000414407 SKP1P63208 163 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 MC1RQ01726 317 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 HYAL2Q12891 473 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 TRAF3Q13114 568 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 DSG2Q14126 1118 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 NCF4Q15080 339 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 GGTA1PQ4G0N0 100 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 C10orf62Q5T681 223 aaPredicted RBP15.66■□□□□ 0.1
LINC00398-201ENST00000414407 MRPL14Q6P1L8 145 aaKnown RBP15.66■□□□□ 0.1
LINC00398-201ENST00000414407 ABHD13Q7L211 337 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 OVCH1Q7RTY7 1134 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 HDXQ7Z353 690 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 ZSCAN1Q8NBB4 408 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 ARMC2Q8NEN0 867 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 OR7G3Q8NG95 312 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 OR52B6Q8NGF0 335 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 MOCOSQ96EN8 888 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 MACROD1Q9BQ69 325 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 C12orf65Q9H3J6 166 aaKnown RBP15.66■□□□□ 0.1
LINC00398-201ENST00000414407 WDR54Q9H977 334 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 VIPAS39Q9H9C1 493 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 CLK4Q9HAZ1 481 aaKnown RBP15.66■□□□□ 0.1
LINC00398-201ENST00000414407 SEMA4BQ9NPR2 832 aaPredicted RBP15.66■□□□□ 0.1
LINC00398-201ENST00000414407 PSD3Q9NYI0 1048 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 IL17BQ9UHF5 180 aa15.66■□□□□ 0.1
LINC00398-201ENST00000414407 GPN3Q9UHW5 284 aaPredicted RBP15.66■□□□□ 0.1
LINC00398-201ENST00000414407 ANKRD11Q6UB99 2663 aaPredicted RBP15.66■□□□□ 0.1
LINC00398-201ENST00000414407 SEC16AO15027 2179 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 ZNF891A8MT65 544 aaPredicted RBP15.65■□□□□ 0.1
LINC00398-201ENST00000414407 K7ENP7 123 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 STATHP02808 62 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 SERPIND1P05546 499 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 SMIM10L1P0DMW3 83 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 CREB1P16220 341 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 PIK3CBP42338 1070 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 CDH13P55290 713 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 CYP4F2P78329 520 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 VAC14Q08AM6 782 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 ASPHQ12797 758 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 ADPRMQ3LIE5 342 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 LIPMQ5VYY2 423 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 INO80CQ6PI98 192 aaPredicted RBP15.65■□□□□ 0.1
LINC00398-201ENST00000414407 VN1R5Q7Z5H4 357 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 MILR1Q7Z6M3 343 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 ZNF473Q8WTR7 871 aaKnown RBP15.65■□□□□ 0.1
LINC00398-201ENST00000414407 SMIM10Q96HG1 83 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 FAM111AQ96PZ2 611 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 ZNF382Q96SR6 550 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 TMBIM4Q9HC24 238 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 ANKHQ9HCJ1 492 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 WDR70Q9NW82 654 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 SLC17A7Q9P2U7 560 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 NXT1Q9UKK6 140 aaKnown RBP15.65■□□□□ 0.1
LINC00398-201ENST00000414407 PADI2Q9Y2J8 665 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 MRPS2Q9Y399 296 aaKnown RBP15.65■□□□□ 0.1
LINC00398-201ENST00000414407 RNF11Q9Y3C5 154 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 CELSR3Q9NYQ7 3312 aa15.65■□□□□ 0.1
LINC00398-201ENST00000414407 MAP1BP46821 2468 aaKnown RBP15.65■□□□□ 0.1
LINC00398-201ENST00000414407 IGLV3-12A0A075B6K2 115 aa15.64■□□□□ 0.09
LINC00398-201ENST00000414407 A0A0A6YYC8 382 aaPredicted RBP15.64■□□□□ 0.09
LINC00398-201ENST00000414407 LRIT2A6NDA9 550 aa15.64■□□□□ 0.09
LINC00398-201ENST00000414407 H3BQF6 201 aa15.64■□□□□ 0.09
LINC00398-201ENST00000414407 I3L1I5 382 aaPredicted RBP15.64■□□□□ 0.09
LINC00398-201ENST00000414407 TM9SF1O15321 606 aa15.64■□□□□ 0.09
LINC00398-201ENST00000414407 CREG1O75629 220 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms