RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 MAT1AQ00266 395 aaKnown RBP9.55□□□□□ -0.88
TMEM248-202ENST00000413593 RGS1Q08116 209 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 HYAL2Q12891 473 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 NFATC3Q12968 1075 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 DOC2AQ14183 400 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 SETDB1Q15047 1291 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 RBBP5Q15291 538 aaKnown RBP9.55□□□□□ -0.88
TMEM248-202ENST00000413593 SYT16Q17RD7 645 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 TECRLQ5HYJ1 363 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 DCAF10Q5QP82 559 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 LGSNQ5TDP6 509 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 TMIGD1Q6UXZ0 262 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 LAPTM4BQ86VI4 370 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 PDSS2Q86YH6 399 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 ZC3H7AQ8IWR0 971 aaKnown RBP9.55□□□□□ -0.88
TMEM248-202ENST00000413593 PRSS58Q8IYP2 241 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 SHISA5Q8N114 240 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 KRT78Q8N1N4 520 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 AFAP1L2Q8N4X5 818 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 TRPV3Q8NET8 790 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 C9orf43Q8TAL5 461 aaPredicted RBP9.55□□□□□ -0.88
TMEM248-202ENST00000413593 CREB3L4Q8TEY5 395 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 WDR34Q96EX3 536 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 PTCD3Q96EY7 689 aaKnown RBP9.55□□□□□ -0.88
TMEM248-202ENST00000413593 CRB3Q9BUF7 120 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 EFCAB11Q9BUY7 163 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 YIPF2Q9BWQ6 316 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 TGIF2Q9GZN2 237 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 SLC6A16Q9GZN6 736 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 PITHD1Q9GZP4 211 aaPredicted RBP9.55□□□□□ -0.88
TMEM248-202ENST00000413593 ANKHQ9HCJ1 492 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 SEMA3GQ9NS98 782 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 COPG2Q9UBF2 871 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 OPTCQ9UBM4 332 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 FETUBQ9UGM5 382 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 NAALAD2Q9Y3Q0 740 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 FER1L5A0AVI2 2057 aa9.55□□□□□ -0.88
TMEM248-202ENST00000413593 IDSB3KWA1 339 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 K7EPI3 171 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 SGK494L7N484 410 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 AGPSO00116 658 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 SOCS6O14544 535 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 GALR3O60755 368 aaPredicted RBP9.54□□□□□ -0.88
TMEM248-202ENST00000413593 RDH16O75452 317 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 CEACAM4O75871 244 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 KLHL18O94889 574 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 SLU7O95391 586 aaKnown RBP9.54□□□□□ -0.88
TMEM248-202ENST00000413593 BMP10O95393 424 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 SERPINA6P08185 405 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 RBP1P09455 135 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 GFAPP14136 432 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 ALOX12P18054 663 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 CD22P20273 847 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 CASP2P42575 452 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 CCL11P51671 97 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 ALDH18A1P54886 795 aaKnown RBP9.54□□□□□ -0.88
TMEM248-202ENST00000413593 IRF8Q02556 426 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 PCDH1Q08174 1060 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 C19orf57Q0VDD7 668 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 CHIT1Q13231 466 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 E2F2Q14209 437 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 NAA30Q147X3 362 aaPredicted RBP9.54□□□□□ -0.88
TMEM248-202ENST00000413593 HERC3Q15034 1050 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 TBCCQ15814 346 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 RBBP7Q16576 425 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 PFKFB4Q16877 469 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 TSNAXIP1Q2TAA8 658 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 DEFB134Q4QY38 66 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 XKR6Q5GH73 641 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 TCTN3Q6NUS6 607 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 KIRREL2Q6UWL6 708 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 TIFABQ6ZNK6 161 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.54□□□□□ -0.88
TMEM248-202ENST00000413593 TTLQ8NG68 377 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 UTP15Q8TED0 518 aaKnown RBP9.54□□□□□ -0.88
TMEM248-202ENST00000413593 UBLCP1Q8WVY7 318 aaPredicted RBP9.54□□□□□ -0.88
TMEM248-202ENST00000413593 MTBPQ96DY7 904 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 SEC16BQ96JE7 1060 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 FER1L6-AS2Q96M78 137 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 CCDC77Q9BR77 488 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 MESP1Q9BRJ9 268 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 AICDAQ9GZX7 198 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 NT5DC2Q9H857 520 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 MLXIPLQ9NP71 852 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 ZNF71Q9NQZ8 489 aaPredicted RBP9.54□□□□□ -0.88
TMEM248-202ENST00000413593 HCN3Q9P1Z3 774 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 CPSF2Q9P2I0 782 aaKnown RBP9.54□□□□□ -0.88
TMEM248-202ENST00000413593 PSMC3IPQ9P2W1 217 aaPredicted RBP9.54□□□□□ -0.88
TMEM248-202ENST00000413593 XPR1Q9UBH6 696 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 C3orf18Q9UK00 162 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 FBXL4Q9UKA2 621 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 ZNF490Q9ULM2 529 aaPredicted RBP9.54□□□□□ -0.88
TMEM248-202ENST00000413593 TP53TG5Q9Y2B4 290 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 ZNF462Q96JM2 2506 aa9.54□□□□□ -0.88
TMEM248-202ENST00000413593 PCSK5Q92824 1860 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 IQANK1A0A1B0GTG1 560 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 URADA6NGE7 173 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 ZNF860A6NHJ4 632 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 LRRC14BA6NHZ5 514 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 B8ZZF3 427 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms