RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 B3GNT3Q9Y2A9 372 aa9.63□□□□□ -0.87
NCKIPSD-202ENST00000413374 COL6A6A6NMZ7 2263 aa9.63□□□□□ -0.87
NCKIPSD-202ENST00000413374 IGHV1-45A0A0A0MS14 117 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 A0A0G2JN53 185 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 A8MUI8 341 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 CLGNO14967 610 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 B4GALT2O60909 372 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 H2AFYO75367 372 aaKnown RBP9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 WFS1O76024 890 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 IPO13O94829 963 aaKnown RBP9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 SEC24DO94855 1032 aaPredicted RBP9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 WISP3O95389 354 aaPredicted RBP9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 PRR35P0CG20 571 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 C8orf89P0DMQ9 161 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 C1GALT1C1LP0DN25 315 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 STX2P32856 288 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 SCTRP47872 440 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 HNMTP50135 292 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 RAB10P61026 200 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 CDKL1Q00532 357 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 RGS1Q08116 209 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 DLG1Q12959 904 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 PCOLCEQ15113 449 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 WHAMMP3Q1A5X7 153 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 TOR1AIP1Q5JTV8 583 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 MROH9Q5TGP6 573 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 B3GNTL1Q67FW5 361 aaPredicted RBP9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 CUZD1Q86UP6 607 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 SNX31Q8N9S9 440 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 UHMK1Q8TAS1 419 aaKnown RBP9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 BRIX1Q8TDN6 353 aaKnown RBP9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 METTL21AQ8WXB1 218 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 CCT6BQ92526 530 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 ANKRD7Q92527 254 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 TM9SF4Q92544 642 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 SNRNP40Q96DI7 357 aaKnown RBP9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 AIF1LQ9BQI0 150 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 TMEM79Q9BSE2 394 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 ALG9Q9H6U8 611 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 PELI2Q9HAT8 420 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 ZDHHC18Q9NUE0 388 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 NINJ2Q9NZG7 142 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 ZFP69BQ9UJL9 534 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 RNF112Q9ULX5 631 aa9.62□□□□□ -0.87
NCKIPSD-202ENST00000413374 SPENQ96T58 3664 aaKnown RBP9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 TNRC6AQ8NDV7 1962 aaKnown RBP9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 SNRNP200O75643 2136 aaKnown RBP9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 TCP11X1B4DZS4 312 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 FAM227AF5H4B4 570 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 CHST10O43529 356 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 CCNT2O60583 730 aaKnown RBP9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 KLHL41O60662 606 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 GALR3O60755 368 aaPredicted RBP9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 S100BP04271 92 aaPredicted RBP9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 ITGAMP11215 1152 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 ALOX12P18054 663 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 TFEBP19484 476 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 SLC6A12P48065 614 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 ATP6V0D1P61421 351 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 BTN3A2P78410 334 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 REEP5Q00765 189 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 IRF9Q00978 393 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 ACTN3Q08043 901 aaPredicted RBP9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 MRPL49Q13405 166 aaKnown RBP9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 PWP1Q13610 501 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 SLBPQ14493 270 aaKnown RBP eCLIP9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 HERC3Q15034 1050 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 ZKSCAN8Q15776 578 aaPredicted RBP9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 EIF2S3LQ2VIR3 472 aaKnown RBP9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 TMEM205Q6UW68 189 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 IGFL3Q6UXB1 125 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 ISLR2Q6UXK2 745 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 SLCO4C1Q6ZQN7 724 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 Q6ZS92 163 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 CPEB2Q7Z5Q1 589 aaKnown RBP9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 ANKRD37Q7Z713 158 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 HPS6Q86YV9 775 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 IQCKQ8N0W5 287 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 MMGT1Q8N4V1 131 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 NT5CQ8TCD5 201 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 UTP15Q8TED0 518 aaKnown RBP9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 KCTD4Q8WVF5 259 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 PSMF1Q92530 271 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 TSLPQ969D9 159 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 NXNL1Q96CM4 212 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 ZNF700Q9H0M5 742 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 EPS8L2Q9H6S3 715 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 DNAJC11Q9NVH1 559 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 ASF1BQ9NVP2 202 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 COPG1Q9Y678 874 aaKnown RBP9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 SLC22A7Q9Y694 548 aa9.61□□□□□ -0.87
NCKIPSD-202ENST00000413374 GCN1Q92616 2671 aaKnown RBP9.6□□□□□ -0.87
NCKIPSD-202ENST00000413374 SEC16AO15027 2179 aa9.6□□□□□ -0.87
NCKIPSD-202ENST00000413374 A8MUA0 341 aa9.6□□□□□ -0.87
NCKIPSD-202ENST00000413374 SUPT3HB4E1H0 165 aa9.6□□□□□ -0.87
NCKIPSD-202ENST00000413374 C4orf51C9J302 202 aa9.6□□□□□ -0.87
NCKIPSD-202ENST00000413374 UBXN8O00124 270 aa9.6□□□□□ -0.87
NCKIPSD-202ENST00000413374 PRAMEF4O60810 478 aa9.6□□□□□ -0.87
NCKIPSD-202ENST00000413374 SH3BGRLO75368 114 aa9.6□□□□□ -0.87
NCKIPSD-202ENST00000413374 SUPT3HO75486 399 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms