RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 EDNRBP24530 442 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 CRISP3P54108 245 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 ADGRF1Q5T601 910 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 OR4F3Q6IEY1 312 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 LRFN4Q6PJG9 635 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 NET1Q7Z628 596 aaPredicted RBP8.16□□□□□ -1.1
SCN9A-203ENST00000409672 RCBTB1Q8NDN9 531 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 PITX2Q99697 317 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 PAPOLGQ9BWT3 736 aaKnown RBP8.16□□□□□ -1.1
SCN9A-203ENST00000409672 TIGARQ9NQ88 270 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 PCDHB14Q9Y5E9 798 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 SOCS2O14508 198 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 ANKRD22Q5VYY1 191 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 OR8H1Q8NGG4 311 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 TMEM168Q9H0V1 697 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 NXF5Q9H1B4 397 aaKnown RBP8.15□□□□□ -1.1
SCN9A-203ENST00000409672 CALML5Q9NZT1 146 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 ACOT7O00154 380 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 COQ9O75208 318 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 BICRALQ6AI39 1079 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 MBOAT1Q6ZNC8 495 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 LAPTM4BQ86VI4 370 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 GPALPP1Q8IXQ4 340 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 ARL10Q8N8L6 244 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 OR13C3Q8NGS6 347 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 RFT1Q96AA3 541 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 RBM4BQ9BQ04 359 aaKnown RBP8.15□□□□□ -1.1
SCN9A-203ENST00000409672 RBM4Q9BWF3 364 aaKnown RBP8.15□□□□□ -1.1
SCN9A-203ENST00000409672 RMI1Q9H9A7 625 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 ZDHHC3Q9NYG2 299 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 ABCD2Q9UBJ2 740 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 NUFIP1Q9UHK0 495 aaKnown RBP8.15□□□□□ -1.1
SCN9A-203ENST00000409672 CNTRLQ7Z7A1 2325 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 IRGMA1A4Y4 181 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 K7EPI3 171 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 M0R129 80 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 HAS3O00219 553 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 FARS2O95363 451 aaKnown RBP8.15□□□□□ -1.1
SCN9A-203ENST00000409672 DEFA5Q01523 94 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 CA9Q16790 459 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 DNM1P34Q6PK57 102 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 ZNF709Q8N972 641 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 TFAP2BQ92481 460 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 RAB8BQ92930 207 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 B4GALT7Q9UBV7 327 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 MAGEL2Q9UJ55 1249 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 C2orf74A8MZ97 194 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 CXCR6O00574 342 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 CCL11P51671 97 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 RPS14P62263 151 aaKnown RBP8.15□□□□□ -1.1
SCN9A-203ENST00000409672 OR5M10Q6IEU7 315 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 INO80EQ8NBZ0 244 aaPredicted RBP8.15□□□□□ -1.1
SCN9A-203ENST00000409672 SMURF2Q9HAU4 748 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 MAN2C1Q9NTJ4 1040 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 HIF1ANQ9NWT6 349 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 RBPJLQ9UBG7 517 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 B3GALT1Q9Y5Z6 326 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 A0A1B0GVI7 797 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 DNM1LO00429 736 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 SERPINA6P08185 405 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 BMP8BP34820 402 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 MAGEA2P43356 314 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 ALG10BQ5I7T1 473 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 WASHC2DQ5SRD0 308 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 ABHD17BQ5VST6 288 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 CDKAL1Q5VV42 579 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 CERS6Q6ZMG9 384 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 BMP8AQ7Z5Y6 402 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 NLGN3Q9NZ94 848 aa8.15□□□□□ -1.1
SCN9A-203ENST00000409672 OR14I1A6ND48 311 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 A8MVJ9 347 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 GJB5O95377 273 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 CSNK2A2P19784 350 aaPredicted RBP8.15□□□□□ -1.11
SCN9A-203ENST00000409672 TMEM107Q6UX40 140 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 TCF12Q99081 682 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 VPS29Q9UBQ0 182 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 CD207Q9UJ71 328 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 R3HDM2Q9Y2K5 976 aaKnown RBP8.15□□□□□ -1.11
SCN9A-203ENST00000409672 A0A1W2PQU0 124 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 TACSTD2P09758 323 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 CD40LGP29965 261 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 GABRA2P47869 451 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 DSTNP60981 165 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 SLAMF1Q13291 335 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 TTMPQ5BVD1 217 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 TIGD4Q8IY51 512 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 ZDHHC1Q8WTX9 485 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 DLG3Q92796 817 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 FUBP3Q96I24 572 aaKnown RBP eCLIP8.15□□□□□ -1.116e-6■■■■□ 23.4
SCN9A-203ENST00000409672 ASB6Q9NWX5 421 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 FAM237AA0A1B0GTK4 181 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 FAM170BA6NMN3 283 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 ENSAO43768 121 aaKnown RBP8.15□□□□□ -1.11
SCN9A-203ENST00000409672 PTDSS1P48651 473 aaKnown RBP8.15□□□□□ -1.11
SCN9A-203ENST00000409672 ZNF84P51523 738 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 GALNT1Q10472 559 aaPredicted RBP8.15□□□□□ -1.11
SCN9A-203ENST00000409672 TMEM115Q12893 351 aaPredicted RBP8.15□□□□□ -1.11
SCN9A-203ENST00000409672 TRABD2AQ86V40 505 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 NPRL2Q8WTW4 380 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms