RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 ZNF317Q96PQ6 595 aaPredicted RBP9.29□□□□□ -0.92
NIF3L1-202ENST00000409020 SECISBP2Q96T21 854 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-202ENST00000409020 OLFM1Q99784 485 aa9.29□□□□□ -0.92
NIF3L1-202ENST00000409020 KIFC1Q9BW19 673 aa9.29□□□□□ -0.92
NIF3L1-202ENST00000409020 SPRTNQ9H040 489 aaPredicted RBP9.29□□□□□ -0.92
NIF3L1-202ENST00000409020 DPH5Q9H2P9 285 aa9.29□□□□□ -0.92
NIF3L1-202ENST00000409020 NEK6Q9HC98 313 aa9.29□□□□□ -0.92
NIF3L1-202ENST00000409020 MOV10Q9HCE1 1003 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-202ENST00000409020 POLG2Q9UHN1 485 aa9.29□□□□□ -0.92
NIF3L1-202ENST00000409020 KCND3Q9UK17 655 aa9.29□□□□□ -0.92
NIF3L1-202ENST00000409020 VPS9D1Q9Y2B5 631 aa9.29□□□□□ -0.92
NIF3L1-202ENST00000409020 NEU2Q9Y3R4 380 aa9.29□□□□□ -0.92
NIF3L1-202ENST00000409020 GOLGA8QA0A0J9YX86 632 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 GOLGA8OA6NCC3 632 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 C21orf140B9A014 251 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 GOLGA8NF8WBI6 632 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 GOLGA8RI6L899 631 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 QSOX1O00391 747 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 ZNF185O15231 689 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 ZNF749O43361 778 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 NIPSNAP2O75323 286 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 MT-ND3P03897 115 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 PSMA4P25789 261 aaKnown RBP9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 PTPN4P29074 926 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 PKLRP30613 574 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 FMO4P31512 558 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 SHMT2P34897 504 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 BDKRB1P46663 353 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 EIF3BP55884 814 aaKnown RBP9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 ATP6V0D1P61421 351 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 NAA20P61599 178 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 YBX1P67809 324 aaKnown RBP9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 MC1RQ01726 317 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 CRTC2Q53ET0 693 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 C1orf189Q5VU69 101 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 FAM198BQ6UWH4 519 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 IDO2Q6ZQW0 420 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 SYTL1Q8IYJ3 562 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 C9orf43Q8TAL5 461 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 LPGAT1Q92604 370 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 HSPBAP1Q96EW2 488 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 FCRL4Q96PJ5 515 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 ADNPQ9H2P0 1102 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 RUBCNLQ9H714 662 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 IFT22Q9H7X7 185 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 PALMDQ9NP74 551 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 FANCFQ9NPI8 374 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 TBC1D23Q9NUY8 699 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 PPP1R14DQ9NXH3 145 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 BFARQ9NZS9 450 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 TNFRSF10DQ9UBN6 386 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 TP53TG5Q9Y2B4 290 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 PCDHB3Q9Y5E6 796 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 HEMK1Q9Y5R4 338 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 CSMD1Q96PZ7 3565 aa9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 SNRNP200O75643 2136 aaKnown RBP9.28□□□□□ -0.92
NIF3L1-202ENST00000409020 A0A0J9YY10 115 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 A8MUI8 341 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 ISM1B1AKI9 464 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 SLCO2B1O94956 709 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 CBSLP0DN79 551 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 PCNAP12004 261 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 CYP2A7P20853 494 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 MAGP20916 626 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 CBSP35520 551 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 COILP38432 576 aaPredicted RBP9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 MAGEA6P43360 314 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 NPY2RP49146 381 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 TTPAP49638 278 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 IST1P53990 364 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 MRPS15P82914 257 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 TLE1Q04724 770 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 SLC9A5Q14940 896 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 UGT8Q16880 541 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 AARS2Q5JTZ9 985 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 ARMC4Q5T2S8 1044 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 IZUMO3Q5VZ72 239 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 ZNF385CQ66K41 422 aaPredicted RBP9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 PTRHD1Q6GMV3 140 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 CNSTQ6PJW8 725 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 DTWD1Q8N5C7 304 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 OR8K5Q8NH50 307 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 ASZ1Q8WWH4 475 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 MAGOHBQ96A72 148 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 SLC30A3Q99726 388 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 LRMDAQ9H2I8 198 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 MRM3Q9HC36 420 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 LATS2Q9NRM7 1088 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 OR6C2Q9NZP2 312 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 ASIC3Q9UHC3 531 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 ANAPC5Q9UJX4 755 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 TLK1Q9UKI8 766 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 SOX13Q9UN79 622 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 POLHQ9Y253 713 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 FARSAQ9Y285 508 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 MAN2B2Q9Y2E5 1009 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 STK38LQ9Y2H1 464 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 CRYL1Q9Y2S2 319 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 SPEF1Q9Y4P9 236 aa9.27□□□□□ -0.93
NIF3L1-202ENST00000409020 FER1L5A0AVI2 2057 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms