RNA–Protein interactions for RNA: ENST00000405805.5

HMGB1-206, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HMGB1, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-206ENST00000405805 FAM92BQ6ZTR7 304 aa11.55□□□□□ -0.56
HMGB1-206ENST00000405805 CACTIN-AS1Q8N1I8 211 aa11.55□□□□□ -0.56
HMGB1-206ENST00000405805 OTUB1Q96FW1 271 aaPredicted RBP11.55□□□□□ -0.56
HMGB1-206ENST00000405805 UROC1Q96N76 676 aa11.55□□□□□ -0.56
HMGB1-206ENST00000405805 TTPALQ9BTX7 342 aa11.55□□□□□ -0.56
HMGB1-206ENST00000405805 YTHDF1Q9BYJ9 559 aaKnown RBP11.55□□□□□ -0.56
HMGB1-206ENST00000405805 HMX1Q9NP08 348 aaPredicted RBP11.55□□□□□ -0.56
HMGB1-206ENST00000405805 NINQ8N4C6 2090 aa11.55□□□□□ -0.56
HMGB1-206ENST00000405805 SCAMP1O15126 338 aa11.55□□□□□ -0.56
HMGB1-206ENST00000405805 RPS17P08708 135 aaKnown RBP11.55□□□□□ -0.56
HMGB1-206ENST00000405805 IL7P13232 177 aa11.55□□□□□ -0.56
HMGB1-206ENST00000405805 DCKP27707 260 aa11.55□□□□□ -0.56
HMGB1-206ENST00000405805 SLC6A4P31645 630 aa11.55□□□□□ -0.56
HMGB1-206ENST00000405805 HTR7P34969 479 aa11.55□□□□□ -0.56
HMGB1-206ENST00000405805 SYNPOQ8N3V7 929 aa11.55□□□□□ -0.56
HMGB1-206ENST00000405805 C1orf52Q8N6N3 182 aaKnown RBP11.55□□□□□ -0.56
HMGB1-206ENST00000405805 OR6C4Q8NGE1 309 aa11.55□□□□□ -0.56
HMGB1-206ENST00000405805 GANCQ8TET4 914 aa11.55□□□□□ -0.56
HMGB1-206ENST00000405805 PIH1D2Q8WWB5 315 aa11.55□□□□□ -0.56
HMGB1-206ENST00000405805 ING5Q8WYH8 240 aa11.55□□□□□ -0.56
HMGB1-206ENST00000405805 AMBRA1Q9C0C7 1298 aa11.55□□□□□ -0.56
HMGB1-206ENST00000405805 SERHL2Q9H4I8 314 aa11.55□□□□□ -0.56
HMGB1-206ENST00000405805 SERHLQ9NQF3 203 aa11.55□□□□□ -0.56
HMGB1-206ENST00000405805 ACSL6Q9UKU0 697 aa11.55□□□□□ -0.56
HMGB1-206ENST00000405805 H7C4K7 107 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 ACOX3O15254 700 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 AP2A2O94973 939 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 GSTM2P28161 218 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 EPHA2P29317 976 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 PTPN5P54829 565 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 ACOX1Q15067 660 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 CYHR1Q6ZMK1 362 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 OR13F1Q8NGS4 319 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 C1GALT1C1Q96EU7 318 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 SMG9Q9H0W8 520 aaKnown RBP11.54□□□□□ -0.56
HMGB1-206ENST00000405805 TPT1P8Q9HAU6 139 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 ARNT2Q9HBZ2 717 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 DHRS7Q9Y394 339 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 PCDHB1Q9Y5F3 818 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 CLCA3PQ9Y6N3 262 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 MTMR11A4FU01 709 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 TOXO94900 526 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 STK19P49842 368 aaPredicted RBP11.54□□□□□ -0.56
HMGB1-206ENST00000405805 ZNF81P51508 661 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 CDC42P60953 191 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 ELP6Q0PNE2 266 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 UGT8Q16880 541 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 CTU2Q2VPK5 515 aaKnown RBP11.54□□□□□ -0.56
HMGB1-206ENST00000405805 ZNF404Q494X3 552 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 SPRED1Q7Z699 444 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 BPIFB1Q8TDL5 484 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 APIPQ96GX9 242 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 CRELD1Q96HD1 420 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 BARD1Q99728 777 aaKnown RBP11.54□□□□□ -0.56
HMGB1-206ENST00000405805 DPCDQ9BVM2 203 aaPredicted RBP11.54□□□□□ -0.56
HMGB1-206ENST00000405805 GSDMCQ9BYG8 508 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 CSNK1G1Q9HCP0 422 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 GPR83Q9NYM4 423 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 KCNN3Q9UGI6 736 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 CLEC4AQ9UMR7 237 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 TMEM5Q9Y2B1 443 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 FAM92AA1XBS5 289 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 E2F3O00716 465 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 MYL12BO14950 172 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 ERN1O75460 977 aaKnown RBP11.54□□□□□ -0.56
HMGB1-206ENST00000405805 MMP2P08253 660 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 CKBP12277 381 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 FGFBP1Q14512 234 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 FBXO22Q8NEZ5 403 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 C1orf74Q96LT6 269 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 CD244Q9BZW8 370 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 OSGEPL1Q9H4B0 414 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 RNF186Q9NXI6 227 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 DNAH12Q6ZR08 3092 aa11.54□□□□□ -0.56
HMGB1-206ENST00000405805 LOC285095A0A1B0GVY8 99 aa11.53□□□□□ -0.56
HMGB1-206ENST00000405805 C2orf78A6NCI8 922 aa11.53□□□□□ -0.56
HMGB1-206ENST00000405805 MROH6A6NGR9 719 aa11.53□□□□□ -0.56
HMGB1-206ENST00000405805 TMEM88BA6NKF7 163 aa11.53□□□□□ -0.56
HMGB1-206ENST00000405805 NARSO43776 548 aaKnown RBP11.53□□□□□ -0.56
HMGB1-206ENST00000405805 GADD45AP24522 165 aa11.53□□□□□ -0.56
HMGB1-206ENST00000405805 STARP49675 285 aa11.53□□□□□ -0.56
HMGB1-206ENST00000405805 CAMK2BQ13554 666 aa11.53□□□□□ -0.56
HMGB1-206ENST00000405805 GALEQ14376 348 aa11.53□□□□□ -0.56
HMGB1-206ENST00000405805 POU4F3Q15319 338 aa11.53□□□□□ -0.56
HMGB1-206ENST00000405805 TSTQ16762 297 aaKnown RBP11.53□□□□□ -0.56
HMGB1-206ENST00000405805 CERS6Q6ZMG9 384 aa11.53□□□□□ -0.56
HMGB1-206ENST00000405805 LGI4Q8N135 537 aa11.53□□□□□ -0.56
HMGB1-206ENST00000405805 SDR16C5Q8N3Y7 309 aa11.53□□□□□ -0.56
HMGB1-206ENST00000405805 OR10G2Q8NGC3 310 aa11.53□□□□□ -0.56
HMGB1-206ENST00000405805 ZNF431Q8TF32 576 aaPredicted RBP11.53□□□□□ -0.56
HMGB1-206ENST00000405805 TMCO6Q96DC7 493 aa11.53□□□□□ -0.56
HMGB1-206ENST00000405805 DUSP26Q9BV47 211 aa11.53□□□□□ -0.56
HMGB1-206ENST00000405805 RNF6Q9Y252 685 aa11.53□□□□□ -0.56
HMGB1-206ENST00000405805 Q9Y3F1 56 aa11.53□□□□□ -0.56
HMGB1-206ENST00000405805 PRSS21Q9Y6M0 314 aa11.53□□□□□ -0.56
HMGB1-206ENST00000405805 GABRR2P28476 465 aa11.53□□□□□ -0.56
HMGB1-206ENST00000405805 DNAJA1P31689 397 aaKnown RBP11.53□□□□□ -0.56
HMGB1-206ENST00000405805 SPAM1P38567 509 aa11.53□□□□□ -0.56
HMGB1-206ENST00000405805 FEN1P39748 380 aaKnown RBP11.53□□□□□ -0.56
HMGB1-206ENST00000405805 PREPP48147 710 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms