RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 GLIPR1L2Q4G1C9 344 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 DNAL1Q4LDG9 190 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 SPANXN4Q5MJ08 99 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 C6orf10Q5SRN2 563 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.55□□□□□ -1.84
RTN4-208ENST00000404909 CCNYL2Q5T2Q4 361 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 DEPDC1Q5TB30 811 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 DNAJC14Q6Y2X3 702 aaPredicted RBP3.55□□□□□ -1.84
RTN4-208ENST00000404909 DGLUCYQ7Z3D6 616 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 RETREG3Q86VR2 466 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 ANKRD46Q86W74 232 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 PAQR7Q86WK9 346 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 SDR16C5Q8N3Y7 309 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 ZBTB44Q8NCP5 570 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 TTLQ8NG68 377 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 FLVCR1-AS1Q8TAF5 88 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 CHTF18Q8WVB6 975 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 RAB3IPQ96QF0 476 aaPredicted RBP3.55□□□□□ -1.84
RTN4-208ENST00000404909 MAP3K3Q99759 626 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 CCDC3Q9BQI4 270 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 MS4A8Q9BY19 250 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 RHBGQ9H310 441 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 KLHL31Q9H511 634 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 SYNDIG1Q9H7V2 258 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 SYNPO2LQ9H987 977 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 WDR41Q9HAD4 459 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 AHSPQ9NZD4 102 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 ADA2Q9NZK5 511 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 SH3BP4Q9P0V3 963 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 ADGRE2Q9UHX3 823 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 PCDHGA2Q9Y5H1 932 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 MDC1Q14676 2089 aaKnown RBP3.54□□□□□ -1.84
RTN4-208ENST00000404909 CNOT1A5YKK6 2376 aaKnown RBP3.54□□□□□ -1.84
RTN4-208ENST00000404909 LOC105369274A0A096LPK9 316 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 LOC102723532A0A0G2JNH3 316 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 A0A0J9YY10 115 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 A0A1B0GTQ1 180 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 A0A1W2PP18 115 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 SERTM1A2A2V5 107 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 FAM221BA6H8Z2 402 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 LRIT2A6NDA9 550 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 CFAP73A6NFT4 308 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 SLC9B1P1A6NJY1 282 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 TRIM38O00635 465 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 ANKRD28O15084 1053 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 SH3BP5O60239 455 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 EEDO75530 441 aaKnown RBP3.54□□□□□ -1.84
RTN4-208ENST00000404909 PDE5AO76074 875 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 B3GALT4O96024 378 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 COX7A2P14406 83 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 ST6GAL1P15907 406 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 TCN1P20061 433 aaPredicted RBP3.54□□□□□ -1.84
RTN4-208ENST00000404909 JAK1P23458 1154 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 HRH2P25021 359 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 TIA1P31483 386 aaKnown RBP eCLIP3.54□□□□□ -1.844e-8■■■□□ 16.3
RTN4-208ENST00000404909 MSX2P35548 267 aaPredicted RBP3.54□□□□□ -1.84
RTN4-208ENST00000404909 SSR2P43308 183 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 RXRGP48443 463 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 GFERP55789 205 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 TAS2R50P59544 299 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 RPS15AP62244 130 aaKnown RBP3.54□□□□□ -1.84
RTN4-208ENST00000404909 RAE1P78406 368 aaKnown RBP3.54□□□□□ -1.84
RTN4-208ENST00000404909 NFYCQ13952 458 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 ZIC1Q15915 447 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 SMU1Q2TAY7 513 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 PAGE3Q5JUK9 113 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 FCRL6Q6DN72 434 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 FRMPD2BQ6IN97 320 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 ZNF425Q6IV72 752 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 FBXO42Q6P3S6 717 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 OGFOD3Q6PK18 319 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 SLC2A7Q6PXP3 512 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 C16orf89Q6UX73 402 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 OR4N4Q8N0Y3 316 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 TMEM132CQ8N3T6 1108 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 EID2Q8N6I1 236 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 PCYOX1LQ8NBM8 494 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 KCT2Q8NC54 265 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 TRPV3Q8NET8 790 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 OR7A2PQ8NGA2 310 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 CEP76Q8TAP6 659 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 ZCCHC10Q8TBK6 192 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 SAP25Q8TEE9 199 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 CREB3L4Q8TEY5 395 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 UTP4Q969X6 686 aaKnown RBP3.54□□□□□ -1.84
RTN4-208ENST00000404909 RERGQ96A58 199 aaPredicted RBP3.54□□□□□ -1.84
RTN4-208ENST00000404909 ZUFSPQ96AP4 578 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 RGMAQ96B86 450 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 OR52E6Q96RD3 313 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 CDRT15Q96T59 188 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 TRIM8Q9BZR9 551 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 PITHD1Q9GZP4 211 aaPredicted RBP3.54□□□□□ -1.84
RTN4-208ENST00000404909 ABCG4Q9H172 646 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 STARD5Q9NSY2 213 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 IRAK4Q9NWZ3 460 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 SOHLH2Q9NX45 425 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 SLAMF8Q9P0V8 285 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 RAB23Q9ULC3 237 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 PADI4Q9UM07 663 aa3.54□□□□□ -1.84
RTN4-208ENST00000404909 SLC6A14Q9UN76 642 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms