RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 PPP1R14CQ8TAE6 165 aa27.94■■■□□ 2.06
USP42-202ENST00000404008 LRFN5Q96NI6 719 aa27.94■■■□□ 2.06
USP42-202ENST00000404008 SLC6A16Q9GZN6 736 aa27.94■■■□□ 2.06
USP42-202ENST00000404008 DHCR7Q9UBM7 475 aaKnown RBP27.94■■■□□ 2.06
USP42-202ENST00000404008 TEX51A0A1B0GUA7 166 aa27.93■■■□□ 2.06
USP42-202ENST00000404008 FFAR3O14843 346 aa27.93■■■□□ 2.06
USP42-202ENST00000404008 GPR42O15529 346 aa27.93■■■□□ 2.06
USP42-202ENST00000404008 SERPINE1P05121 402 aa27.93■■■□□ 2.06
USP42-202ENST00000404008 CAPN1P07384 714 aa27.93■■■□□ 2.06
USP42-202ENST00000404008 MUM1Q2TAK8 710 aa27.93■■■□□ 2.06
USP42-202ENST00000404008 HSP90B2PQ58FF3 399 aa27.93■■■□□ 2.06
USP42-202ENST00000404008 TTLL10Q6ZVT0 673 aa27.93■■■□□ 2.06
USP42-202ENST00000404008 TIPARPQ7Z3E1 657 aaKnown RBP27.93■■■□□ 2.06
USP42-202ENST00000404008 GALNT6Q8NCL4 622 aa27.93■■■□□ 2.06
USP42-202ENST00000404008 HUS1BQ8NHY5 278 aa27.93■■■□□ 2.06
USP42-202ENST00000404008 ZNF473Q8WTR7 871 aaKnown RBP27.93■■■□□ 2.06
USP42-202ENST00000404008 SLC29A3Q9BZD2 475 aa27.93■■■□□ 2.06
USP42-202ENST00000404008 CCDC86Q9H6F5 360 aaKnown RBP27.93■■■□□ 2.06
USP42-202ENST00000404008 TXLNGQ9NUQ3 528 aa27.93■■■□□ 2.06
USP42-202ENST00000404008 ADGRE2Q9UHX3 823 aa27.93■■■□□ 2.06
USP42-202ENST00000404008 DSCR3O14972 297 aa27.92■■■□□ 2.06
USP42-202ENST00000404008 CAPNS1P04632 268 aa27.92■■■□□ 2.06
USP42-202ENST00000404008 ENO1P06733 434 aaKnown RBP27.92■■■□□ 2.06
USP42-202ENST00000404008 CHRNGP07510 517 aa27.92■■■□□ 2.06
USP42-202ENST00000404008 BGNP21810 368 aa27.92■■■□□ 2.06
USP42-202ENST00000404008 ARRB2P32121 409 aa27.92■■■□□ 2.06
USP42-202ENST00000404008 PIK3CBP42338 1070 aa27.92■■■□□ 2.06
USP42-202ENST00000404008 GALNT1Q10472 559 aaPredicted RBP27.92■■■□□ 2.06
USP42-202ENST00000404008 GPS2Q13227 327 aa27.92■■■□□ 2.06
USP42-202ENST00000404008 MAP7Q14244 749 aa27.92■■■□□ 2.06
USP42-202ENST00000404008 FAM219BQ5XKK7 198 aa27.92■■■□□ 2.06
USP42-202ENST00000404008 FRG2Q64ET8 278 aa27.92■■■□□ 2.06
USP42-202ENST00000404008 C6orf15Q6UXA7 325 aaPredicted RBP27.92■■■□□ 2.06
USP42-202ENST00000404008 CCT6BQ92526 530 aa27.92■■■□□ 2.06
USP42-202ENST00000404008 FRG2BQ96QU4 278 aa27.92■■■□□ 2.06
USP42-202ENST00000404008 SHCBP1LQ9BZQ2 653 aa27.92■■■□□ 2.06
USP42-202ENST00000404008 MRPS2Q9Y399 296 aaKnown RBP27.92■■■□□ 2.06
USP42-202ENST00000404008 A0A1B0GX78 115 aa27.91■■■□□ 2.06
USP42-202ENST00000404008 LRIT2A6NDA9 550 aa27.91■■■□□ 2.06
USP42-202ENST00000404008 NEFHP12036 1026 aa27.91■■■□□ 2.06
USP42-202ENST00000404008 SNRPNP63162 240 aaKnown RBP27.91■■■□□ 2.06
USP42-202ENST00000404008 DDX39BQ13838 428 aaKnown RBP27.91■■■□□ 2.06
USP42-202ENST00000404008 NDUFA9Q16795 377 aa27.91■■■□□ 2.06
USP42-202ENST00000404008 ARL13AQ5H913 290 aaPredicted RBP27.91■■■□□ 2.06
USP42-202ENST00000404008 C10orf62Q5T681 223 aaPredicted RBP27.91■■■□□ 2.06
USP42-202ENST00000404008 ZNF385CQ66K41 422 aaPredicted RBP27.91■■■□□ 2.06
USP42-202ENST00000404008 TTC19Q6DKK2 380 aaPredicted RBP27.91■■■□□ 2.06
USP42-202ENST00000404008 DTX1Q86Y01 620 aa27.91■■■□□ 2.06
USP42-202ENST00000404008 DSELQ8IZU8 1212 aa27.91■■■□□ 2.06
USP42-202ENST00000404008 RNF175Q8N4F7 328 aa27.91■■■□□ 2.06
USP42-202ENST00000404008 PROKR1Q8TCW9 393 aa27.91■■■□□ 2.06
USP42-202ENST00000404008 GBP5Q96PP8 586 aa27.91■■■□□ 2.06
USP42-202ENST00000404008 KCNA7Q96RP8 456 aa27.91■■■□□ 2.06
USP42-202ENST00000404008 MTERF1Q99551 399 aaKnown RBP27.91■■■□□ 2.06
USP42-202ENST00000404008 AICDAQ9GZX7 198 aa27.91■■■□□ 2.06
USP42-202ENST00000404008 TNFRSF12AQ9NP84 129 aa27.91■■■□□ 2.06
USP42-202ENST00000404008 DMRT3Q9NQL9 472 aa27.91■■■□□ 2.06
USP42-202ENST00000404008 SNX6Q9UNH7 406 aa27.91■■■□□ 2.06
USP42-202ENST00000404008 MEN1O00255 615 aa27.9■■■□□ 2.06
USP42-202ENST00000404008 NR1D1P20393 614 aa27.9■■■□□ 2.06
USP42-202ENST00000404008 ALAS2P22557 587 aa27.9■■■□□ 2.06
USP42-202ENST00000404008 GRK2P25098 689 aa27.9■■■□□ 2.06
USP42-202ENST00000404008 HNRNPH1P31943 449 aaKnown RBP27.9■■■□□ 2.06
USP42-202ENST00000404008 NEK2P51955 445 aa27.9■■■□□ 2.06
USP42-202ENST00000404008 IFT88Q13099 833 aa27.9■■■□□ 2.06
USP42-202ENST00000404008 FAM53BQ14153 422 aa27.9■■■□□ 2.06
USP42-202ENST00000404008 ADPRMQ3LIE5 342 aa27.9■■■□□ 2.06
USP42-202ENST00000404008 C1orf189Q5VU69 101 aa27.9■■■□□ 2.06
USP42-202ENST00000404008 ATG14Q6ZNE5 492 aa27.9■■■□□ 2.06
USP42-202ENST00000404008 CUZD1Q86UP6 607 aa27.9■■■□□ 2.06
USP42-202ENST00000404008 DTWD1Q8N5C7 304 aa27.9■■■□□ 2.06
USP42-202ENST00000404008 ZCCHC10Q8TBK6 192 aa27.9■■■□□ 2.06
USP42-202ENST00000404008 METTL6Q8TCB7 284 aa27.9■■■□□ 2.06
USP42-202ENST00000404008 FGF11Q92914 225 aa27.9■■■□□ 2.06
USP42-202ENST00000404008 MS4A8Q9BY19 250 aa27.9■■■□□ 2.06
USP42-202ENST00000404008 KLHL31Q9H511 634 aa27.9■■■□□ 2.06
USP42-202ENST00000404008 ELOVL6Q9H5J4 265 aa27.9■■■□□ 2.06
USP42-202ENST00000404008 EML4Q9HC35 981 aaKnown RBP27.9■■■□□ 2.06
USP42-202ENST00000404008 SLC22A7Q9Y694 548 aa27.9■■■□□ 2.06
USP42-202ENST00000404008 TMEM114B3SHH9 223 aa27.89■■■□□ 2.06
USP42-202ENST00000404008 FOXE1O00358 373 aaPredicted RBP27.89■■■□□ 2.06
USP42-202ENST00000404008 RAD1O60671 282 aa27.89■■■□□ 2.06
USP42-202ENST00000404008 LIPCP11150 499 aa27.89■■■□□ 2.06
USP42-202ENST00000404008 FOXA1P55317 472 aa27.89■■■□□ 2.06
USP42-202ENST00000404008 PCBP4P57723 403 aaKnown RBP27.89■■■□□ 2.06
USP42-202ENST00000404008 STXBP1P61764 594 aaKnown RBP27.89■■■□□ 2.06
USP42-202ENST00000404008 PHEXP78562 749 aa27.89■■■□□ 2.06
USP42-202ENST00000404008 TOR1AIP1Q5JTV8 583 aa27.89■■■□□ 2.06
USP42-202ENST00000404008 TCHHL1Q5QJ38 904 aaPredicted RBP27.89■■■□□ 2.06
USP42-202ENST00000404008 UNQ6494/PRO21346Q6UXR6 183 aa27.89■■■□□ 2.06
USP42-202ENST00000404008 NLGN4XQ8N0W4 816 aa27.89■■■□□ 2.06
USP42-202ENST00000404008 ESX1Q8N693 406 aa27.89■■■□□ 2.06
USP42-202ENST00000404008 NLGN4YQ8NFZ3 816 aaPredicted RBP27.89■■■□□ 2.06
USP42-202ENST00000404008 MTFMTQ96DP5 389 aaKnown RBP27.89■■■□□ 2.06
USP42-202ENST00000404008 MVB12AQ96EY5 273 aa27.89■■■□□ 2.06
USP42-202ENST00000404008 NDOR1Q9UHB4 597 aa27.89■■■□□ 2.06
USP42-202ENST00000404008 ZFHX4Q86UP3 3567 aa27.89■■■□□ 2.06
USP42-202ENST00000404008 URADA6NGE7 173 aa27.88■■■□□ 2.05
USP42-202ENST00000404008 MAGEB17A8MXT2 336 aa27.88■■■□□ 2.05
USP42-202ENST00000404008 C1QTNF9BB2RNN3 333 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms