RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 CYB5D1Q6P9G0 228 aa31.73■■■□□ 2.67
CSNK1E-204ENST00000403904 ZNF655Q8N720 491 aaPredicted RBP31.73■■■□□ 2.67
CSNK1E-204ENST00000403904 KCT2Q8NC54 265 aa31.73■■■□□ 2.67
CSNK1E-204ENST00000403904 USP7Q93009 1102 aa31.73■■■□□ 2.67
CSNK1E-204ENST00000403904 RNF31Q96EP0 1072 aa31.73■■■□□ 2.67
CSNK1E-204ENST00000403904 C7orf26Q96N11 449 aa31.73■■■□□ 2.67
CSNK1E-204ENST00000403904 MARCOQ9UEW3 520 aaPredicted RBP31.73■■■□□ 2.67
CSNK1E-204ENST00000403904 KITP10721 976 aa31.73■■■□□ 2.67
CSNK1E-204ENST00000403904 FGF5P12034 268 aa31.73■■■□□ 2.67
CSNK1E-204ENST00000403904 SERPINB1P30740 379 aa31.73■■■□□ 2.67
CSNK1E-204ENST00000403904 HYAL2Q12891 473 aa31.73■■■□□ 2.67
CSNK1E-204ENST00000403904 PRTGQ2VWP7 1150 aa31.73■■■□□ 2.67
CSNK1E-204ENST00000403904 OR8K5Q8NH50 307 aa31.73■■■□□ 2.67
CSNK1E-204ENST00000403904 NT5CQ8TCD5 201 aa31.73■■■□□ 2.67
CSNK1E-204ENST00000403904 NLNQ9BYT8 704 aa31.73■■■□□ 2.67
CSNK1E-204ENST00000403904 ZSCAN9O15535 394 aaPredicted RBP31.72■■■□□ 2.67
CSNK1E-204ENST00000403904 TIAF1O95411 115 aa31.72■■■□□ 2.67
CSNK1E-204ENST00000403904 SERPINA6P08185 405 aa31.72■■■□□ 2.67
CSNK1E-204ENST00000403904 PHEXP78562 749 aa31.72■■■□□ 2.67
CSNK1E-204ENST00000403904 RGS1Q08116 209 aa31.72■■■□□ 2.67
CSNK1E-204ENST00000403904 C10orf62Q5T681 223 aaPredicted RBP31.72■■■□□ 2.67
CSNK1E-204ENST00000403904 PWWP2BQ6NUJ5 590 aa31.72■■■□□ 2.67
CSNK1E-204ENST00000403904 BPHLQ86WA6 291 aaPredicted RBP31.72■■■□□ 2.67
CSNK1E-204ENST00000403904 CRLF3Q8IUI8 442 aa31.72■■■□□ 2.67
CSNK1E-204ENST00000403904 TWIST2Q8WVJ9 160 aa31.72■■■□□ 2.67
CSNK1E-204ENST00000403904 MS4A8Q9BY19 250 aa31.72■■■□□ 2.67
CSNK1E-204ENST00000403904 KLHL31Q9H511 634 aa31.72■■■□□ 2.67
CSNK1E-204ENST00000403904 CCDC134Q9H6E4 229 aa31.72■■■□□ 2.67
CSNK1E-204ENST00000403904 PTGDR2Q9Y5Y4 395 aa31.72■■■□□ 2.67
CSNK1E-204ENST00000403904 FOXE1O00358 373 aaPredicted RBP31.71■■■□□ 2.67
CSNK1E-204ENST00000403904 TXNDC9O14530 226 aa31.71■■■□□ 2.67
CSNK1E-204ENST00000403904 CHEK2O96017 543 aa31.71■■■□□ 2.67
CSNK1E-204ENST00000403904 GRM7Q14831 915 aa31.71■■■□□ 2.67
CSNK1E-204ENST00000403904 SLC6A16Q9GZN6 736 aa31.71■■■□□ 2.67
CSNK1E-204ENST00000403904 AICDAQ9GZX7 198 aa31.71■■■□□ 2.67
CSNK1E-204ENST00000403904 OR51B5Q9H339 312 aa31.71■■■□□ 2.67
CSNK1E-204ENST00000403904 TUBB1Q9H4B7 451 aa31.71■■■□□ 2.67
CSNK1E-204ENST00000403904 ENAMQ9NRM1 1142 aa31.71■■■□□ 2.67
CSNK1E-204ENST00000403904 FITM1A5D6W6 292 aa31.7■■■□□ 2.67
CSNK1E-204ENST00000403904 LRIT2A6NDA9 550 aa31.7■■■□□ 2.67
CSNK1E-204ENST00000403904 HNRNPH1P31943 449 aaKnown RBP31.7■■■□□ 2.67
CSNK1E-204ENST00000403904 RAB15P59190 212 aa31.7■■■□□ 2.67
CSNK1E-204ENST00000403904 SNRPNP63162 240 aaKnown RBP31.7■■■□□ 2.67
CSNK1E-204ENST00000403904 TLDC1Q6P9B6 456 aa31.7■■■□□ 2.67
CSNK1E-204ENST00000403904 CMTM7Q96FZ5 175 aa31.7■■■□□ 2.67
CSNK1E-204ENST00000403904 F2RL3Q96RI0 385 aa31.7■■■□□ 2.67
CSNK1E-204ENST00000403904 TAAR9Q96RI9 348 aa31.7■■■□□ 2.67
CSNK1E-204ENST00000403904 B3GALT1Q9Y5Z6 326 aa31.7■■■□□ 2.67
CSNK1E-204ENST00000403904 HYKKA2RU49 373 aa31.69■■■□□ 2.66
CSNK1E-204ENST00000403904 ZNF749O43361 778 aa31.69■■■□□ 2.66
CSNK1E-204ENST00000403904 SKAP2O75563 359 aaPredicted RBP31.69■■■□□ 2.66
CSNK1E-204ENST00000403904 ETHE1O95571 254 aa31.69■■■□□ 2.66
CSNK1E-204ENST00000403904 TOR1AIP1Q5JTV8 583 aa31.69■■■□□ 2.66
CSNK1E-204ENST00000403904 MANEAQ5SRI9 462 aa31.69■■■□□ 2.66
CSNK1E-204ENST00000403904 DCAF12Q5T6F0 453 aa31.69■■■□□ 2.66
CSNK1E-204ENST00000403904 CEACAM20Q6UY09 585 aa31.69■■■□□ 2.66
CSNK1E-204ENST00000403904 TMEM126BQ8IUX1 230 aa31.69■■■□□ 2.66
CSNK1E-204ENST00000403904 TTC29Q8NA56 475 aaPredicted RBP31.69■■■□□ 2.66
CSNK1E-204ENST00000403904 ZCCHC10Q8TBK6 192 aa31.69■■■□□ 2.66
CSNK1E-204ENST00000403904 KLK13Q9UKR3 277 aa31.69■■■□□ 2.66
CSNK1E-204ENST00000403904 SCRG1O75711 98 aa31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 GABREP78334 506 aa31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 PDCD2Q16342 344 aaPredicted RBP31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 LARP7Q4G0J3 582 aaKnown RBP eCLIP31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 TMEM214Q6NUQ4 689 aaKnown RBP31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 DDIASQ8IXT1 998 aa31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 KIRREL3Q8IZU9 778 aa31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 PIWIL2Q8TC59 973 aaKnown RBP31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 REXO4Q9GZR2 422 aaKnown RBP31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 POLR1BQ9H9Y6 1135 aa31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 BRF2Q9HAW0 419 aa31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 MRPS2Q9Y399 296 aaKnown RBP31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 PCDHGA8Q9Y5G5 932 aa31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 SCN3AQ9NY46 2000 aa31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 SAP18O00422 153 aaKnown RBP31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 PIP5K1BO14986 540 aa31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 TNFSF15O95150 251 aa31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 MED26O95402 600 aa31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 JUNP05412 331 aaKnown RBP31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 LINC00032P0C843 101 aa31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 PTX3P26022 381 aaPredicted RBP31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 ARHGEF39Q8N4T4 335 aa31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 AFAP1L2Q8N4X5 818 aa31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 MS4A6EQ96DS6 147 aa31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 C10orf90Q96M02 699 aa31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 ACPTQ9BZG2 426 aa31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 PPT2Q9UMR5 302 aa31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 SLC12A4Q9UP95 1085 aa31.68■■■□□ 2.66
CSNK1E-204ENST00000403904 SPINK2P20155 84 aa31.67■■■□□ 2.66
CSNK1E-204ENST00000403904 STXBP1P61764 594 aaKnown RBP31.67■■■□□ 2.66
CSNK1E-204ENST00000403904 HMGCS1Q01581 520 aa31.67■■■□□ 2.66
CSNK1E-204ENST00000403904 ZNF33BQ06732 778 aa31.67■■■□□ 2.66
CSNK1E-204ENST00000403904 CSTF3Q12996 717 aaKnown RBP31.67■■■□□ 2.66
CSNK1E-204ENST00000403904 ADPRMQ3LIE5 342 aa31.67■■■□□ 2.66
CSNK1E-204ENST00000403904 DEPDC1Q5TB30 811 aa31.67■■■□□ 2.66
CSNK1E-204ENST00000403904 KHDRBS2Q5VWX1 349 aaKnown RBP31.67■■■□□ 2.66
CSNK1E-204ENST00000403904 CHSY3Q70JA7 882 aa31.67■■■□□ 2.66
CSNK1E-204ENST00000403904 NDC1Q9BTX1 674 aa31.67■■■□□ 2.66
CSNK1E-204ENST00000403904 PSD3Q9NYI0 1048 aa31.67■■■□□ 2.66
CSNK1E-204ENST00000403904 C4orf51C9J302 202 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms