RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 ADCK2Q7Z695 626 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ARMC10Q8N2F6 343 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 RAB42Q8N4Z0 105 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 HORMAD2Q8N7B1 307 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ZFP62Q8NB50 900 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 OR5M9Q8NGP3 310 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 GIMAP7Q8NHV1 300 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 LPGAT1Q92604 370 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TTC1Q99614 292 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 LPAR4Q99677 370 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 POLDIP3Q9BY77 421 aaKnown RBP11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 DEFB127Q9H1M4 99 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TP63Q9H3D4 680 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ZNHIT6Q9NWK9 470 aaKnown RBP11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 MED16Q9Y2X0 877 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 LIPGQ9Y5X9 500 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 FREM3P0C091 2139 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 KIAA1549Q9HCM3 1950 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 A0A0G2JNJ9 132 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 FAM237BA0A1B0GVD1 139 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CTAGE15A4D2H0 777 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 MAGEB17A8MXT2 336 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 GOLGA8KD6RF30 607 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 F8W8V4 182 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 GOLGA8TH3BQL2 631 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 SMAPO00193 183 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TXNDC9O14530 226 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PSMD3O43242 534 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TJP3O95049 919 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 GLI4P10075 376 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PKMP14618 531 aaKnown RBP11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 NMBRP28336 390 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TTPAP49638 278 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 OR4D2P58180 307 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 OLR1P78380 273 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 BTG2P78543 158 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ACTN3Q08043 901 aaPredicted RBP11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ARHGAP19Q14CB8 494 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 NAA25Q14CX7 972 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 NDUFA9Q16795 377 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 P3H1Q32P28 736 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 GXYLT1Q4G148 440 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CES3Q6UWW8 571 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 C16orf47Q6ZP98 133 aaPredicted RBP11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 LINC00523Q86TU6 105 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CTAGE6Q86UF2 777 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 SLC26A11Q86WA9 606 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CDC20BQ86Y33 519 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 EID3Q8N140 333 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 POGLUT1Q8NBL1 392 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ATG4AQ8WYN0 398 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 LRRC45Q96CN5 670 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 FOPNLQ96NB1 174 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ALPK1Q96QP1 1244 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PANX3Q96QZ0 392 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 RASSF1Q9NS23 344 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 Q9UFV3 132 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ZNF223Q9UK11 482 aaPredicted RBP11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 NAALAD2Q9Y3Q0 740 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PCDHA13Q9Y5I0 950 aa11.11□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ARHGAP21Q5T5U3 1957 aa11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 NCKAP5O14513 1909 aa11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 KCNE1BA0A087WTH5 132 aa11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 NPIPA2E9PIF3 369 aa11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 NPIPA3F8WFD2 350 aa11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 SNPHO15079 494 aa11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PRKNO60260 465 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 IMPA1P29218 277 aa11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ATP5DP30049 168 aa11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 RWDD2BP57060 319 aa11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TBX2Q13207 712 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TRIM14Q14142 442 aa11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ARSKQ6UWY0 536 aa11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CYHR1Q6ZMK1 362 aa11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 REXO1L1PQ8IX06 675 aa11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 AFAP1L2Q8N4X5 818 aa11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 LRRC57Q8N9N7 239 aa11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 GSDMBQ8TAX9 411 aa11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 MAGEC3Q8TD91 643 aa11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 SLCO2A1Q92959 643 aa11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TTYH2Q9BSA4 534 aa11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CLEC4MQ9H2X3 399 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CRIM1Q9NZV1 1036 aa11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PACSIN2Q9UNF0 486 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ROS1P08922 2347 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 MED12Q93074 2177 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 GRID2IPA4D2P6 1211 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 FAM166BA8MTA8 275 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 KPNA5O15131 536 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 SLC16A5O15375 505 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PRMT3O60678 531 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 NDUFS3O75489 264 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CLCN7P51798 805 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TAS2R50P59544 299 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TPM4P67936 248 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ABATP80404 500 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 MPP1Q00013 466 aa11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 OASLQ15646 514 aaKnown RBP11.09□□□□□ -0.63
SPTLC1P3-201ENST00000403408 AARS2Q5JTZ9 985 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms