RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 ASB11Q8WXH4 323 aa19.12■□□□□ 0.65
CCDC47-202ENST00000403162 CHST8Q9H2A9 424 aa19.12■□□□□ 0.65
CCDC47-202ENST00000403162 ZNF334Q9HCZ1 680 aaPredicted RBP19.12■□□□□ 0.65
CCDC47-202ENST00000403162 DNAJC11Q9NVH1 559 aa19.12■□□□□ 0.65
CCDC47-202ENST00000403162 CCDC59Q9P031 241 aaKnown RBP19.12■□□□□ 0.65
CCDC47-202ENST00000403162 MN1Q10571 1320 aaPredicted RBP19.11■□□□□ 0.65
CCDC47-202ENST00000403162 C2orf78A6NCI8 922 aa19.11■□□□□ 0.65
CCDC47-202ENST00000403162 SMAD6O43541 496 aaKnown RBP19.11■□□□□ 0.65
CCDC47-202ENST00000403162 CDK1P06493 297 aa19.11■□□□□ 0.65
CCDC47-202ENST00000403162 HIST1H2AGP0C0S8 130 aaPredicted RBP19.11■□□□□ 0.65
CCDC47-202ENST00000403162 JUPP14923 745 aa19.11■□□□□ 0.65
CCDC47-202ENST00000403162 HIST1H2ADP20671 130 aa19.11■□□□□ 0.65
CCDC47-202ENST00000403162 CRYBA2P53672 197 aa19.11■□□□□ 0.65
CCDC47-202ENST00000403162 B4GALNT1Q00973 533 aa19.11■□□□□ 0.65
CCDC47-202ENST00000403162 GPR153Q6NV75 609 aa19.11■□□□□ 0.65
CCDC47-202ENST00000403162 PNCKQ6P2M8 343 aa19.11■□□□□ 0.65
CCDC47-202ENST00000403162 FAM124AQ86V42 546 aa19.11■□□□□ 0.65
CCDC47-202ENST00000403162 PAF1Q8N7H5 531 aa19.11■□□□□ 0.65
CCDC47-202ENST00000403162 TPD52L3Q96J77 140 aa19.11■□□□□ 0.65
CCDC47-202ENST00000403162 HIST1H2AHQ96KK5 128 aa19.11■□□□□ 0.65
CCDC47-202ENST00000403162 LYSMD1Q96S90 227 aa19.11■□□□□ 0.65
CCDC47-202ENST00000403162 HIST1H2AJQ99878 128 aa19.11■□□□□ 0.65
CCDC47-202ENST00000403162 CTRCQ99895 268 aa19.11■□□□□ 0.65
CCDC47-202ENST00000403162 H2AFJQ9BTM1 129 aa19.11■□□□□ 0.65
CCDC47-202ENST00000403162 TPT1P8Q9HAU6 139 aa19.11■□□□□ 0.65
CCDC47-202ENST00000403162 CLCA1A8K7I4 914 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 NUAK1O60285 661 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 PTTG1O95997 202 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 C21orf33P30042 268 aaPredicted RBP19.1■□□□□ 0.65
CCDC47-202ENST00000403162 GSSP48637 474 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 ZNF45Q02386 682 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 TEKQ02763 1124 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 PRKCDQ05655 676 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 CDH18Q13634 790 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 RETSATQ6NUM9 610 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 TSPAN33Q86UF1 283 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 ZSWIM9Q86XI8 627 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 CLECL1Q8IZS7 167 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 COPS8Q99627 209 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 C2orf49Q9BVC5 232 aaPredicted RBP19.1■□□□□ 0.65
CCDC47-202ENST00000403162 ABCG8Q9H221 673 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 ADPRHL2Q9NX46 363 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 ANAPC1Q9H1A4 1944 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 IGLV3-16A0A075B6K0 115 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 GFRA2O00451 464 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 TBX1O43435 398 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 SUV39H1O43463 412 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 CPSF4O95639 269 aaKnown RBP19.1■□□□□ 0.65
CCDC47-202ENST00000403162 OXSR1O95747 527 aaPredicted RBP19.1■□□□□ 0.65
CCDC47-202ENST00000403162 VIPP01282 170 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 RPLP0P05388 317 aaKnown RBP19.1■□□□□ 0.65
CCDC47-202ENST00000403162 MPC1LP0DKB6 136 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 GKP32189 559 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 SLC19A1P41440 591 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 SP140Q13342 867 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 FBXO43Q4G163 708 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 ATAD3BQ5T9A4 648 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 AKAP14Q86UN6 197 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 HS6ST3Q8IZP7 471 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 POC5Q8NA72 575 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 KBTBD8Q8NFY9 601 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 HTRA1Q92743 480 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 PROX1Q92786 737 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 KCNC2Q96PR1 638 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 SPASTQ9UBP0 616 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 CORO2BQ9UQ03 480 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 SLC22A14Q9Y267 594 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 HCFC2Q9Y5Z7 792 aa19.1■□□□□ 0.65
CCDC47-202ENST00000403162 DSCR3O14972 297 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 SLC16A5O15375 505 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 OR56A5P0C7T3 313 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 PPIBP23284 216 aaKnown RBP19.09■□□□□ 0.65
CCDC47-202ENST00000403162 RRM2P31350 389 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 TPRG1LQ5T0D9 272 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 GGHQ92820 318 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 CDADC1Q9BWV3 514 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 C6orf62Q9GZU0 229 aaPredicted RBP19.09■□□□□ 0.65
CCDC47-202ENST00000403162 ZNF232Q9UNY5 417 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 TESMINQ9Y4I5 508 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 NPIPB15A6NHN6 443 aaPredicted RBP19.09■□□□□ 0.65
CCDC47-202ENST00000403162 A8MX80 341 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 TMEM229AB2RXF0 380 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 YY2O15391 372 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 UGDHO60701 494 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 KCNK2O95069 426 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 PCGF2P35227 344 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 LIMK1P53667 647 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 CHIT1Q13231 466 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 ZNF697Q5TEC3 545 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 APCDD1Q8J025 514 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 RNF175Q8N4F7 328 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 DOHHQ9BU89 302 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 RUBCNLQ9H714 662 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 VPS29Q9UBQ0 182 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 FZD4Q9ULV1 537 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 RUVBL1Q9Y265 456 aaKnown RBP19.09■□□□□ 0.65
CCDC47-202ENST00000403162 PCDHGA3Q9Y5H0 932 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 LYVE1Q9Y5Y7 322 aa19.09■□□□□ 0.65
CCDC47-202ENST00000403162 C1orf226A1L170 272 aa19.08■□□□□ 0.65
CCDC47-202ENST00000403162 GFYI3L273 518 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms