RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 PHF24Q9UPV7 400 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 SH3PXD2BA1X283 911 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 STK25O00506 426 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 CCDC159P0C7I6 412 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 HSD3B1P14060 373 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 AGXTP21549 392 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 HSD3B2P26439 372 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 ZNF57Q68EA5 555 aaPredicted RBP17.89■□□□□ 0.45
USP48-204ENST00000400301 SPRED1Q7Z699 444 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 CENPSQ8N2Z9 138 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 AQP11Q8NBQ7 271 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 OR10G6Q8NH81 332 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 BTN2A2Q8WVV5 523 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 MAL2Q969L2 176 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 SLCO4A1Q96BD0 722 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 ZNF385DQ9H6B1 395 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 A0A1B0GTL3 188 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 A0A1B0GTW7 788 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 PRAMEF12O95522 483 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 ARL4DP49703 201 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 TBPL1P62380 186 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 PTSQ03393 145 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 GALNT13Q8IUC8 556 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 SLC38A4Q969I6 547 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 P2RY13Q9BPV8 354 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 DOHHQ9BU89 302 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 ASB1Q9Y576 335 aa17.89■□□□□ 0.45
USP48-204ENST00000400301 PIPSLA2A3N6 862 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 C1GALT1C1LP0DN25 315 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 CDKL4Q5MAI5 379 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 METTL2BQ6P1Q9 378 aaKnown RBP17.88■□□□□ 0.45
USP48-204ENST00000400301 YIPF4Q9BSR8 244 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 LINC00597Q9H2U6 94 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 GSAPA4D1B5 854 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 RB1P06400 928 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 TACR1P25103 407 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 MXD1Q05195 221 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 NPRL3Q12980 569 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 MRPL58Q14197 206 aaKnown RBP17.88■□□□□ 0.45
USP48-204ENST00000400301 KIAA1324Q6UXG2 1013 aaKnown RBP17.88■□□□□ 0.45
USP48-204ENST00000400301 CLMPQ9H6B4 373 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 CERS4Q9HA82 394 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 HEMK1Q9Y5R4 338 aaPredicted RBP17.88■□□□□ 0.45
USP48-204ENST00000400301 CR2P20023 1033 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 AZGP1P25311 298 aaKnown RBP17.88■□□□□ 0.45
USP48-204ENST00000400301 XKR7Q5GH72 579 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 RFLNAQ6ZTI6 216 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 PLEKHM3Q6ZWE6 761 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 USP43Q70EL4 1123 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 DCP2Q8IU60 420 aaKnown RBP17.88■□□□□ 0.45
USP48-204ENST00000400301 RNF175Q8N4F7 328 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 SRFBP1Q8NEF9 429 aaKnown RBP17.88■□□□□ 0.45
USP48-204ENST00000400301 OR52L1Q8NGH7 329 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 PPP1R14BQ96C90 147 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 ALPK1Q96QP1 1244 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 CNPPD1Q9BV87 410 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 ACSL6Q9UKU0 697 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 PEX16Q9Y5Y5 336 aa17.88■□□□□ 0.45
USP48-204ENST00000400301 A0A0J9YVX5 310 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 VIPP01282 170 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 STATHP02808 62 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 DNTTP04053 509 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 HPGDP15428 266 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 HMGA1P17096 107 aaKnown RBP17.87■□□□□ 0.45
USP48-204ENST00000400301 BMP7P18075 431 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 MAT2AP31153 395 aaKnown RBP17.87■□□□□ 0.45
USP48-204ENST00000400301 PIK3CBP42338 1070 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 RGS8P57771 180 aaPredicted RBP17.87■□□□□ 0.45
USP48-204ENST00000400301 LRRTM4Q86VH4 590 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 CPA6Q8N4T0 437 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 FAM110BQ8TC76 370 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 WFDC5Q8TCV5 224 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 CAPSLQ8WWF8 208 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 SLC9A6Q92581 669 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 RAB8BQ92930 207 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 IL17FQ96PD4 163 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 TAS2R9Q9NYW1 312 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 FXYD1O00168 92 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 TFECO14948 347 aaPredicted RBP17.87■□□□□ 0.45
USP48-204ENST00000400301 ARHGEF15O94989 841 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 APODP05090 189 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 ETFAP13804 333 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 MADCAM1Q13477 382 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 CD300LGQ6UXG3 332 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 PTRH1Q86Y79 214 aaKnown RBP17.87■□□□□ 0.45
USP48-204ENST00000400301 ELOVL2Q9NXB9 296 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 PTGFRNQ9P2B2 879 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 STOX2Q9P2F5 926 aaPredicted RBP17.87■□□□□ 0.45
USP48-204ENST00000400301 KNL1Q8NG31 2342 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 AXIN1O15169 862 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 SLC31A1O15431 190 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 CBX3Q13185 183 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 MPP7Q5T2T1 576 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 VITQ6UXI7 678 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 CELF5Q8N6W0 485 aaKnown RBP17.87■□□□□ 0.45
USP48-204ENST00000400301 MYLIPQ8WY64 445 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 SMPDL3AQ92484 453 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 FBXO10Q9UK96 956 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 HCN4Q9Y3Q4 1203 aa17.87■□□□□ 0.45
USP48-204ENST00000400301 ST14Q9Y5Y6 855 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms