RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 HIPK2Q9H2X6 1198 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 PCDHGB1Q9Y5G3 927 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 EFCAB7A8K855 629 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 B8ZZF3 427 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 BLOC1S5-TXNDC5H3BN57 136 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 POLR1CO15160 346 aaPredicted RBP10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 TNK2Q07912 1038 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 C6orf183Q5T699 404 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 TLDC1Q6P9B6 456 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 C1GALT1C1Q96EU7 318 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 PDLIM1O00151 329 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 RPP14O95059 124 aaKnown RBP10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 ALDOAP04075 364 aaKnown RBP10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 ASGR2P07307 311 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 GGT2P36268 569 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 CTSKP43235 329 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 RAB8AP61006 207 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 CYP1B1Q16678 543 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 BTBD16Q32M84 506 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 SLC39A4Q6P5W5 647 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 BRAT1Q6PJG6 821 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 POTEHQ6S545 545 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 LAS2Q8IYD9 372 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 FITM2Q8N6M3 262 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 DCBLD1Q8N8Z6 715 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 SLC7A6OSQ96CW6 309 aaPredicted RBP10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 TTYH2Q9BSA4 534 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 GRHL1Q9NZI5 618 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 ADGRE2Q9UHX3 823 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 CA5BQ9Y2D0 317 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 U3KQV3 271 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 DCCP43146 1447 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 ZNF860A6NHJ4 632 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 EEF1E1-BLOC1S5C9J1V9 151 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 EEF1E1O43324 174 aaKnown RBP10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 SLC22A3O75751 556 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 CD79AP11912 226 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 ZNF28P17035 718 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 GRIA2P42262 883 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 ACADVLP49748 655 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 MYLK3Q32MK0 819 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 PIWIL4Q7Z3Z4 852 aaKnown RBP10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 DCP2Q8IU60 420 aaKnown RBP10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 OR7A2PQ8NGA2 310 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 THOC3Q96J01 351 aaKnown RBP10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 ZNF576Q9H609 170 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 SP140LQ9H930 580 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 KCNMB3Q9NPA1 279 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 IL1RAPQ9NPH3 570 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 EIF2B3Q9NR50 452 aaKnown RBP10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 CRNNQ9UBG3 495 aaPredicted RBP10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 ALG5Q9Y673 324 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 AKAP12Q02952 1782 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 CSNK2A2P19784 350 aaPredicted RBP10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 LUMP51884 338 aaPredicted RBP10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 LILRA4P59901 499 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 PTP4A2Q12974 167 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 RUNX3Q13761 415 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 ALG10BQ5I7T1 473 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 DCDC5Q6ZRR9 648 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 NUDT13Q86X67 352 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 ZNF761Q86XN6 746 aaPredicted RBP10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 CILP2Q8IUL8 1156 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 PYDC1Q8WXC3 89 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 AP3S1Q92572 193 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 CCDC74AQ96AQ1 378 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 DHX33Q9H6R0 707 aaKnown RBP10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 ZNF180Q9UJW8 692 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 UTS2RQ9UKP6 389 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 NFS1Q9Y697 457 aa10.64□□□□□ -0.71
CACNA1C-216ENST00000399638 A0A0A6YYH2 397 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 A0A1W2PQU0 124 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 A6NJ64 397 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 SLC16A5O15375 505 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 NTSR1P30989 418 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 PLCXD2Q0VAA5 305 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 COL9A3Q14050 684 aaPredicted RBP10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 SMYD5Q6GMV2 418 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 TTC27Q6P3X3 843 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 IL17RCQ8NAC3 791 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 CHTF18Q8WVB6 975 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 FAXDC2Q96IV6 333 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 PWWP2AQ96N64 755 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 HERPUD2Q9BSE4 406 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 HINT2Q9BX68 163 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 MED28Q9H204 178 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 R3HDM2Q9Y2K5 976 aaKnown RBP10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 C11orf98E9PRG8 122 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 CRYBA1P05813 215 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 CAPGP40121 348 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 TAF1AQ15573 450 aaPredicted RBP10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 ARHGAP12Q8IWW6 846 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 PTERQ96BW5 349 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 P2RY11Q96G91 374 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 PAPOLGQ9BWT3 736 aaKnown RBP10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 NELFAQ9H3P2 528 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 HMGXB4Q9UGU5 601 aa10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 NME6O75414 186 aaPredicted RBP10.63□□□□□ -0.71
CACNA1C-216ENST00000399638 ATE1O95260 518 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms