RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 NXPH2O95156 264 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 USP17L7P0C7H9 530 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 CXCL8P10145 99 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 POU3F2P20265 443 aaPredicted RBP6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 UBA1P22314 1058 aaKnown RBP6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 CYP2F1P24903 491 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 BMPR1AP36894 532 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 MAGEB1P43366 347 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 CLCN7P51798 805 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 CHN2P52757 468 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 C21orf59P57076 290 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 TGM3Q08188 693 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 TYSND1Q2T9J0 566 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 CUZD1Q86UP6 607 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 LIX1LQ8IVB5 337 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 EID3Q8N140 333 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 NDNFQ8TB73 568 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 SGTBQ96EQ0 304 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 HPDLQ96IR7 371 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 ZNF641Q96N77 438 aaPredicted RBP6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 PEBP4Q96S96 227 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 EBF4Q9BQW3 602 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 SPATA9Q9BWV2 254 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 EBF3Q9H4W6 596 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 DHX35Q9H5Z1 703 aaKnown RBP6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 BRF2Q9HAW0 419 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 LRRC4Q9HBW1 653 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 PRMT7Q9NVM4 692 aaPredicted RBP6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 GPATCH2LQ9NWQ4 482 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 CDH22Q9UJ99 828 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 PCDHB11Q9Y5F2 797 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 ACTL7AQ9Y615 435 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 EFCAB7A8K855 629 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 SUPT3HB4E1H0 165 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 PLIN3O60664 434 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 GATBO75879 557 aaKnown RBP6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 KAT7O95251 611 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 MSX2P35548 267 aaPredicted RBP6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 PRMT2P55345 433 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 PKNOX1P55347 436 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 UBE2G2P60604 165 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 PSME3P61289 254 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 MRPL49Q13405 166 aaKnown RBP6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 MRM1Q6IN84 353 aaKnown RBP6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 METTL7BQ6UX53 244 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 C16orf89Q6UX73 402 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 FAM183BPQ6ZVS7 135 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 ADHFE1Q8IWW8 467 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 CDK20Q8IZL9 346 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 OR2L8Q8NGY9 312 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 CPT1CQ8TCG5 803 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 C22orf15Q8WYQ4 148 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 SIGLEC10Q96LC7 697 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 C10orf90Q96M02 699 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 KCNK17Q96T54 332 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 SNRNP25Q9BV90 132 aaKnown RBP6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 ELOVL4Q9GZR5 314 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 ASB7Q9H672 318 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 RMND5AQ9H871 391 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 PNO1Q9NRX1 252 aaKnown RBP6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 RGS18Q9NS28 235 aa6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 SIRT3Q9NTG7 399 aaPredicted RBP6.37□□□□□ -1.39
TM9SF4-202ENST00000398022 IGKV6D-21A0A0A0MT36 114 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 HACD1B0YJ81 288 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 UGT1A9O60656 530 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 NDUFS3O75489 264 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 SULT1C4O75897 302 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 EDN1P05305 212 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 CTXN2P0C2S0 81 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 PIM1P11309 404 aaPredicted RBP6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 PGAM1P18669 254 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 SERPINF1P36955 418 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 HK3P52790 923 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 ABCE1P61221 599 aaKnown RBP6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 TEDDM1Q5T9Z0 273 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 IRAK1BP1Q5VVH5 260 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 MBLAC2Q68D91 279 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 TRMT10BQ6PF06 316 aaKnown RBP6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 LCLAT1Q6UWP7 414 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 C1orf162Q8NEQ5 155 aaPredicted RBP6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 OR8J1Q8NGP2 316 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 PCDH19Q8TAB3 1148 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 TFB1MQ8WVM0 346 aaKnown RBP6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 TSEN15Q8WW01 171 aaKnown RBP6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 MR1Q95460 341 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 BSCL2Q96G97 398 aaPredicted RBP6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 BOD1Q96IK1 185 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 PLEKHA8Q96JA3 519 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 FER1L6-AS2Q96M78 137 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 SPATA13Q96N96 652 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 CASD1Q96PB1 797 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 ADAMTS10Q9H324 1103 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 ZNF395Q9H8N7 513 aaPredicted RBP6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 UGT1A7Q9HAW7 530 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 UGT1A10Q9HAW8 530 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 UGT1A8Q9HAW9 530 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 XPNPEP3Q9NQH7 507 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 CD274Q9NZQ7 290 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 ERVK-18Q9QC07 812 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 ABCD2Q9UBJ2 740 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms