RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 TRIM46Q7Z4K8 759 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 BPHLQ86WA6 291 aaPredicted RBP18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 ZNF655Q8N720 491 aaPredicted RBP18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 CCT6BQ92526 530 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 CMTM7Q96FZ5 175 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 HBEGFQ99075 208 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 MACROD1Q9BQ69 325 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 AICDAQ9GZX7 198 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 FBXO8Q9NRD0 319 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 STARD5Q9NSY2 213 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 RARRES3Q9UL19 164 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 RUVBL1Q9Y265 456 aaKnown RBP18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 PTGDR2Q9Y5Y4 395 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 FAM149AA5PLN7 773 aa18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 LRIT2A6NDA9 550 aa18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SLCO1B7G3V0H7 640 aa18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 PIP5K1BO14986 540 aa18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 ZSCAN9O15535 394 aaPredicted RBP18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SKAP2O75563 359 aaPredicted RBP18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 OR2B3O76000 313 aa18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 ETHE1O95571 254 aa18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 JUNP05412 331 aaKnown RBP18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 VIMP08670 466 aaKnown RBP18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 KITP10721 976 aa18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 GCGRP47871 477 aa18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 IL11RAQ14626 422 aa18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 PDCD2Q16342 344 aaPredicted RBP18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 TLDC1Q6P9B6 456 aa18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 MTERF4Q7Z6M4 381 aaKnown RBP18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 LRRC34Q8IZ02 419 aa18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 ARHGEF39Q8N4T4 335 aa18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 GBP7Q8N8V2 638 aaPredicted RBP18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 WDR36Q8NI36 951 aaKnown RBP18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SERPINI1Q99574 410 aa18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 CCT7Q99832 543 aa18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 NLNQ9BYT8 704 aa18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 ACPTQ9BZG2 426 aa18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 APMAPQ9HDC9 416 aa18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 FGFR1OP2Q9NVK5 253 aa18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 VTI1BQ9UEU0 232 aa18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SERTAD3Q9UJW9 196 aa18.55■□□□□ 0.56
MAP1LC3A-203ENST00000397709 PMS2P1A4D2B8 440 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 ZNF195O14628 629 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 PLD2O14939 933 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 HDAC3O15379 428 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 TGFB1P01137 390 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 ITIH1P19827 911 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 PTX3P26022 381 aaPredicted RBP18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 HNRNPH1P31943 449 aaKnown RBP18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 ETV5P41161 510 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 EMP3P54852 163 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 STXBP1P61764 594 aaKnown RBP18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 BTKQ06187 659 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 CUL3Q13618 768 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 GRM7Q14831 915 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 XKR7Q5GH72 579 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 TOR1AIP1Q5JTV8 583 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 DEPDC1Q5TB30 811 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 KHDRBS2Q5VWX1 349 aaKnown RBP18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 TMEM214Q6NUQ4 689 aaKnown RBP18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 DGLUCYQ7Z3D6 616 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 MAVSQ7Z434 540 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 WDR75Q8IWA0 830 aaKnown RBP18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 DDIASQ8IXT1 998 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 GPR135Q8IZ08 494 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 TTC29Q8NA56 475 aaPredicted RBP18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 KCT2Q8NC54 265 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 C19orf60Q96EN9 201 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 OR51B5Q9H339 312 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 KLHL31Q9H511 634 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 IRAK4Q9NWZ3 460 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 CCL27Q9Y4X3 112 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 USH1CQ9Y6N9 552 aa18.54■□□□□ 0.56
MAP1LC3A-203ENST00000397709 NPIPB8E9PQR5 432 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SLC28A1O00337 649 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 POLR1CO15160 346 aaPredicted RBP18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SEMA3DO95025 777 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 TGDSO95455 350 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 LINC00032P0C843 101 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 ALOX15P16050 662 aaPredicted RBP18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 RAB15P59190 212 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 HMGCS1Q01581 520 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 TUBB8Q3ZCM7 444 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 TMEM35AQ53FP2 167 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 GARNL3Q5VVW2 1013 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 Q6ZSR9 355 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 CHSY3Q70JA7 882 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 PPP1R3BQ86XI6 285 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 MARCH9Q86YJ5 346 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 OR2T11Q8NH01 316 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 MS4A6EQ96DS6 147 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 CHMP6Q96FZ7 201 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 C10orf90Q96M02 699 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 C3orf30Q96M34 536 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 F2RL3Q96RI0 385 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 NUF2Q9BZD4 464 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 REXO4Q9GZR2 422 aaKnown RBP18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 MEAF6Q9HAF1 191 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 PRM3Q9NNZ6 103 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms