RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 BBS10Q8TAM1 723 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 WDR20Q8TBZ3 569 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 ATG4AQ8WYN0 398 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 MCUR1Q96AQ8 359 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 CAPNS2Q96L46 248 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 SIGLEC11Q96RL6 698 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 RAB40CQ96S21 281 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 DDOQ99489 341 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 NPAS2Q99743 824 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 RTP3Q9BQQ7 232 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 TMEM43Q9BTV4 400 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 DNTTIP1Q9H147 329 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 ADNPQ9H2P0 1102 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 PIGMQ9H3S5 423 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 MYNNQ9NPC7 610 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 DBNLQ9UJU6 430 aaKnown RBP6.46□□□□□ -1.37
SMCO1-201ENST00000397537 PLA2G2DQ9UNK4 145 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 KCNJ14Q9UNX9 436 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 ERVK-19Q9WJR5 959 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 SLC22A14Q9Y267 594 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 SH3GLB1Q9Y371 365 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 DMRT1Q9Y5R6 373 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 CPSF1Q10570 1443 aaKnown RBP6.46□□□□□ -1.38
SMCO1-201ENST00000397537 TMEM89A2RUT3 159 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 LRRIQ3A6PVS8 624 aaPredicted RBP6.46□□□□□ -1.38
SMCO1-201ENST00000397537 GOLGA8TH3BQL2 631 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 HIP1O00291 1037 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 FLRT2O43155 660 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 FCMRO60667 390 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 PRAF2O60831 178 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 STAG3L2P0CL84 134 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 CCDC166P0CW27 439 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 S100A1P23297 94 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 HTR2AP28223 471 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 LCN1P31025 176 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 CSNK1EP49674 416 aaKnown RBP6.46□□□□□ -1.38
SMCO1-201ENST00000397537 RAE1P78406 368 aaKnown RBP6.46□□□□□ -1.38
SMCO1-201ENST00000397537 ZNF844Q08AG5 666 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 STK38Q15208 465 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 CARTPTQ16568 116 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 MAPK6Q16659 721 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 CCDC153Q494R4 210 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 TMEM119Q4V9L6 283 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 AADACL2Q6P093 401 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 KYAT3Q6YP21 454 aaKnown RBP6.46□□□□□ -1.38
SMCO1-201ENST00000397537 ZNF852Q6ZMS4 543 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 GDF7Q7Z4P5 450 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 NRARPQ7Z6K4 114 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 GCNT2Q8N0V5 402 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 PYROXD2Q8N2H3 581 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 GPR137CQ8N3F9 429 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 NUDT10Q8NFP7 164 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 MAGEC3Q8TD91 643 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 CD300LFQ8TDQ1 290 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 ATL1Q8WXF7 558 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 CPA5Q8WXQ8 436 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 UTP4Q969X6 686 aaKnown RBP6.46□□□□□ -1.38
SMCO1-201ENST00000397537 MARS2Q96GW9 593 aaKnown RBP6.46□□□□□ -1.38
SMCO1-201ENST00000397537 SNF8Q96H20 258 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 BLZF1Q9H2G9 400 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 CUEDC2Q9H467 287 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 RGCCQ9H4X1 137 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 CHMP1AQ9HD42 196 aaPredicted RBP6.46□□□□□ -1.38
SMCO1-201ENST00000397537 Q9N2J8 555 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 TRIM36Q9NQ86 728 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 ZDHHC18Q9NUE0 388 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 MIS18AQ9NYP9 233 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 CTSFQ9UBX1 484 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 CFL2Q9Y281 166 aa6.46□□□□□ -1.38
SMCO1-201ENST00000397537 TIAM2Q8IVF5 1701 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 USP47Q96K76 1375 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 C4BP0C0L5 1744 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 CPED1A4D0V7 1026 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 TMEM191CA6NGB0 347 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 ANKRD30BLA7E2S9 258 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 B5MCH6 92 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 POLR1CO15160 346 aaPredicted RBP6.45□□□□□ -1.38
SMCO1-201ENST00000397537 TLX3O43711 291 aaPredicted RBP6.45□□□□□ -1.38
SMCO1-201ENST00000397537 PRAMEF2O60811 474 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 LRP3O75074 770 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 MBPP02686 304 aaPredicted RBP6.45□□□□□ -1.38
SMCO1-201ENST00000397537 TMEM191BP0C7N4 346 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 POLR2EP19388 210 aaKnown RBP6.45□□□□□ -1.38
SMCO1-201ENST00000397537 ACO1P21399 889 aaKnown RBP6.45□□□□□ -1.38
SMCO1-201ENST00000397537 TGM2P21980 687 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 SLC26A2P50443 739 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 BPIFB4P59827 614 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 SELPLGQ14242 412 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 ZNF124Q15973 351 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 SNCBQ16143 134 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 ALKBH6Q3KRA9 238 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 KRT40Q6A162 431 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 ZC3H14Q6PJT7 736 aaKnown RBP6.45□□□□□ -1.38
SMCO1-201ENST00000397537 ANKFN1Q8N957 763 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 BOLLQ8N9W6 283 aaKnown RBP6.45□□□□□ -1.38
SMCO1-201ENST00000397537 ZNF596Q8TC21 504 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 DYDC1Q8WWB3 177 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 ACDQ96AP0 544 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 SLC47A1Q96FL8 570 aa6.45□□□□□ -1.38
SMCO1-201ENST00000397537 TMEM209Q96SK2 561 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms