RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 LRIT2A6NDA9 550 aa26.26■■□□□ 1.79
CPNE1-203ENST00000397442 CASC3O15234 703 aaKnown RBP26.26■■□□□ 1.79
CPNE1-203ENST00000397442 SEMA3DO95025 777 aa26.26■■□□□ 1.79
CPNE1-203ENST00000397442 RETP07949 1114 aa26.26■■□□□ 1.79
CPNE1-203ENST00000397442 PRPS2P11908 318 aa26.26■■□□□ 1.79
CPNE1-203ENST00000397442 MAPK1P28482 360 aa26.26■■□□□ 1.79
CPNE1-203ENST00000397442 CD1CP29017 333 aa26.26■■□□□ 1.79
CPNE1-203ENST00000397442 IL12AP29459 219 aa26.26■■□□□ 1.79
CPNE1-203ENST00000397442 GPLD1P80108 840 aa26.26■■□□□ 1.79
CPNE1-203ENST00000397442 ADPRMQ3LIE5 342 aa26.26■■□□□ 1.79
CPNE1-203ENST00000397442 FAM92BQ6ZTR7 304 aa26.26■■□□□ 1.79
CPNE1-203ENST00000397442 RNF44Q7L0R7 432 aa26.26■■□□□ 1.79
CPNE1-203ENST00000397442 COMMD6Q7Z4G1 85 aa26.26■■□□□ 1.79
CPNE1-203ENST00000397442 SPRED1Q7Z699 444 aa26.26■■□□□ 1.79
CPNE1-203ENST00000397442 BTBD3Q9Y2F9 522 aa26.26■■□□□ 1.79
CPNE1-203ENST00000397442 A0A0J9YVX5 310 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 EME2A4GXA9 379 aaPredicted RBP26.25■■□□□ 1.79
CPNE1-203ENST00000397442 SLC9B1P1A6NJY1 282 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 C9JVG2 144 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 PLPP1O14494 284 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 SLC22A3O75751 556 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 ATP5HO75947 161 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 THRAP10827 490 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 CYLC2Q14093 348 aaPredicted RBP26.25■■□□□ 1.79
CPNE1-203ENST00000397442 UBE3DQ7Z6J8 389 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 C19orf47Q8N9M1 422 aaKnown RBP26.25■■□□□ 1.79
CPNE1-203ENST00000397442 WDR48Q8TAF3 677 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 TM4SF19Q96DZ7 209 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 AHCYL2Q96HN2 611 aaKnown RBP26.25■■□□□ 1.79
CPNE1-203ENST00000397442 TGM7Q96PF1 710 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 ZFYVE21Q9BQ24 234 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 FAM60AQ9NP50 221 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 SLC52A3Q9NQ40 469 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 NDUFS4O43181 175 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 SH3BP5O60239 455 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 SERPIND1P05546 499 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 JAK1P23458 1154 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 TIA1P31483 386 aaKnown RBP eCLIP26.25■■□□□ 1.793e-7■■■■■ 41.5
CPNE1-203ENST00000397442 CSF2RBP32927 897 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 PROX2Q3B8N5 592 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 PERM1Q5SV97 790 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 DBX2Q6ZNG2 339 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 RIPOR1Q6ZS17 1223 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 NUDT8Q8WV74 236 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 THAP11Q96EK4 314 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 EGLN2Q96KS0 407 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 KLHL31Q9H511 634 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 LHX9Q9NQ69 397 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 DNAAF2Q9NVR5 837 aaKnown RBP26.25■■□□□ 1.79
CPNE1-203ENST00000397442 TMEM45AQ9NWC5 275 aa26.25■■□□□ 1.79
CPNE1-203ENST00000397442 LOC105369274A0A096LPK9 316 aa26.24■■□□□ 1.79
CPNE1-203ENST00000397442 LOC102723532A0A0G2JNH3 316 aa26.24■■□□□ 1.79
CPNE1-203ENST00000397442 TLCD2A6NGC4 264 aa26.24■■□□□ 1.79
CPNE1-203ENST00000397442 DUX1O43812 170 aa26.24■■□□□ 1.79
CPNE1-203ENST00000397442 KLHL18O94889 574 aa26.24■■□□□ 1.79
CPNE1-203ENST00000397442 ATXN3P54252 364 aaPredicted RBP26.24■■□□□ 1.79
CPNE1-203ENST00000397442 AMZ1Q400G9 498 aa26.24■■□□□ 1.79
CPNE1-203ENST00000397442 FRMPD2BQ6IN97 320 aa26.24■■□□□ 1.79
CPNE1-203ENST00000397442 BLOC1S3Q6QNY0 202 aa26.24■■□□□ 1.79
CPNE1-203ENST00000397442 OR4N4Q8N0Y3 316 aa26.24■■□□□ 1.79
CPNE1-203ENST00000397442 CLHC1Q8NHS4 586 aa26.24■■□□□ 1.79
CPNE1-203ENST00000397442 FBXO27Q8NI29 283 aa26.24■■□□□ 1.79
CPNE1-203ENST00000397442 SLC13A3Q8WWT9 602 aa26.24■■□□□ 1.79
CPNE1-203ENST00000397442 ZDHHC12Q96GR4 267 aa26.24■■□□□ 1.79
CPNE1-203ENST00000397442 TMEM74Q96NL1 305 aa26.24■■□□□ 1.79
CPNE1-203ENST00000397442 TSSK3Q96PN8 268 aa26.24■■□□□ 1.79
CPNE1-203ENST00000397442 SORBS1Q9BX66 1292 aaKnown RBP26.24■■□□□ 1.79
CPNE1-203ENST00000397442 CPED1A4D0V7 1026 aa26.23■■□□□ 1.79
CPNE1-203ENST00000397442 C4orf51C9J302 202 aa26.23■■□□□ 1.79
CPNE1-203ENST00000397442 HCRTR1O43613 425 aa26.23■■□□□ 1.79
CPNE1-203ENST00000397442 C9P02748 559 aa26.23■■□□□ 1.79
CPNE1-203ENST00000397442 SNRPB2P08579 225 aaKnown RBP26.23■■□□□ 1.79
CPNE1-203ENST00000397442 ZNF806P0C7X5 589 aa26.23■■□□□ 1.79
CPNE1-203ENST00000397442 BSGP35613 385 aa26.23■■□□□ 1.79
CPNE1-203ENST00000397442 PPM1FP49593 454 aaPredicted RBP26.23■■□□□ 1.79
CPNE1-203ENST00000397442 ASPGQ86U10 573 aa26.23■■□□□ 1.79
CPNE1-203ENST00000397442 MS4A6EQ96DS6 147 aa26.23■■□□□ 1.79
CPNE1-203ENST00000397442 CD180Q99467 661 aa26.23■■□□□ 1.79
CPNE1-203ENST00000397442 SLC6A16Q9GZN6 736 aa26.23■■□□□ 1.79
CPNE1-203ENST00000397442 REXO4Q9GZR2 422 aaKnown RBP26.23■■□□□ 1.79
CPNE1-203ENST00000397442 PCDHGB2Q9Y5G2 931 aa26.23■■□□□ 1.79
CPNE1-203ENST00000397442 UNC13CQ8NB66 2214 aa26.22■■□□□ 1.79
CPNE1-203ENST00000397442 RTCAO00442 366 aaKnown RBP26.22■■□□□ 1.79
CPNE1-203ENST00000397442 PCDH7O60245 1069 aa26.22■■□□□ 1.79
CPNE1-203ENST00000397442 MYO1DO94832 1006 aa26.22■■□□□ 1.79
CPNE1-203ENST00000397442 CLDN8P56748 225 aa26.22■■□□□ 1.79
CPNE1-203ENST00000397442 RCAN2Q14206 197 aa26.22■■□□□ 1.79
CPNE1-203ENST00000397442 MAPRE2Q15555 327 aa26.22■■□□□ 1.79
CPNE1-203ENST00000397442 TMEM35AQ53FP2 167 aa26.22■■□□□ 1.79
CPNE1-203ENST00000397442 RINLQ6ZS11 566 aa26.22■■□□□ 1.79
CPNE1-203ENST00000397442 USP53Q70EK8 1073 aa26.22■■□□□ 1.79
CPNE1-203ENST00000397442 KRTCAP2Q8N6L1 136 aa26.22■■□□□ 1.79
CPNE1-203ENST00000397442 NT5CQ8TCD5 201 aa26.22■■□□□ 1.79
CPNE1-203ENST00000397442 MN1Q10571 1320 aaPredicted RBP26.22■■□□□ 1.79
CPNE1-203ENST00000397442 IGHV5-51A0A0C4DH38 117 aa26.22■■□□□ 1.79
CPNE1-203ENST00000397442 ANKRD65E5RJM6 399 aa26.22■■□□□ 1.79
CPNE1-203ENST00000397442 P2RX6O15547 441 aa26.22■■□□□ 1.79
CPNE1-203ENST00000397442 HNRNPCL1O60812 293 aaKnown RBP26.22■■□□□ 1.79
CPNE1-203ENST00000397442 GBAP04062 536 aa26.22■■□□□ 1.79
CPNE1-203ENST00000397442 ANXA4P09525 319 aaPredicted RBP26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms