RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 TRABD2BA6NFA1 517 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 FCHO1O14526 889 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 CTSVO60911 334 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 C9P02748 559 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 GSTM2P28161 218 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 AHRP35869 848 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 DUSP3P51452 185 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 RPS15AP62244 130 aaKnown RBP16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 ERVK-8P63133 956 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 PHEXP78562 749 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 SQSTM1Q13501 440 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 KIAA0040Q15053 153 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 SMU1Q2TAY7 513 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 AP5B1Q2VPB7 878 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 GALNTL6Q49A17 601 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 WDR74Q6RFH5 385 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 FAM92BQ6ZTR7 304 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 ZFAND4Q86XD8 727 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 TBC1D19Q8N5T2 526 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 FITM2Q8N6M3 262 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 TTLQ8NG68 377 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 CREB3L4Q8TEY5 395 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 CMTM7Q96FZ5 175 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 ZDHHC12Q96GR4 267 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 CATSPER2Q96P56 530 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 TGM7Q96PF1 710 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 CD180Q99467 661 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 CCDC3Q9BQI4 270 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 LRTM1Q9HBL6 345 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 SAR1AQ9NR31 198 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 C1orf109Q9NX04 203 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 VPS29Q9UBQ0 182 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 ZFP69BQ9UJL9 534 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 SLC12A4Q9UP95 1085 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 TRIM33Q9UPN9 1127 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 AP1M2Q9Y6Q5 423 aa16.19■□□□□ 0.18
TSPAN4-205ENST00000397406 TLCD2A6NGC4 264 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 KIF1CO43896 1103 aaKnown RBP16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 CCDC22O60826 627 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 CLEC3AO75596 197 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 RFPL3O75679 317 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 TGFB1P01137 390 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 CKMT2P17540 419 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 NCF2P19878 526 aaPredicted RBP16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 PPM1FP49593 454 aaPredicted RBP16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 CYP4F2P78329 520 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 DAB2P98082 770 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 CYP4F3Q08477 520 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 AMZ1Q400G9 498 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 RFTN2Q52LD8 501 aaPredicted RBP16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 FOXR1Q6PIV2 292 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 RNF44Q7L0R7 432 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 TRPM8Q7Z2W7 1104 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 SPATA19Q7Z5L4 167 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 PLXDC1Q8IUK5 500 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 C19orf47Q8N9M1 422 aaKnown RBP16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 IFI44Q8TCB0 444 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 APIPQ96GX9 242 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 MARK4Q96L34 752 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 FCRL4Q96PJ5 515 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 LRRC37BQ96QE4 947 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 OR2A5Q96R48 311 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 MS4A8Q9BY19 250 aa16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 G3BP2Q9UN86 482 aaKnown RBP16.18■□□□□ 0.18
TSPAN4-205ENST00000397406 COL27A1Q8IZC6 1860 aaPredicted RBP16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 IGHV5-51A0A0C4DH38 117 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 A0A1W2PQM1 296 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 SLC9B1P1A6NJY1 282 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 UBDO15205 165 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 ACP1P24666 158 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 CCL7P80098 99 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 EMX2Q04743 252 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 TBL3Q12788 808 aaKnown RBP16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 USP53Q70EK8 1073 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 VN1R4Q7Z5H5 301 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 CLNKQ7Z7G1 428 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 TMPRSS12Q86WS5 348 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 CARFQ8N187 725 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 GALNT15Q8N3T1 639 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 CPSF7Q8N684 471 aaKnown RBP16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 FNDC5Q8NAU1 212 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 THAP11Q96EK4 314 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 C11orf24Q96F05 449 aaPredicted RBP16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 METTL2AQ96IZ6 378 aaKnown RBP16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 FCRL1Q96LA6 429 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 SERPINI1Q99574 410 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 ZFYVE21Q9BQ24 234 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 OR51B5Q9H339 312 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 CCDC86Q9H6F5 360 aaKnown RBP16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 FAM60AQ9NP50 221 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 TMEM9Q9P0T7 183 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 SEMA5BQ9P283 1151 aa16.17■□□□□ 0.18
TSPAN4-205ENST00000397406 DSPP15924 2871 aaKnown RBP16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 SH3BGRLO75368 114 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 SEC22BO75396 215 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 PTX3P26022 381 aaPredicted RBP16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 ATP4BP51164 291 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 DIO3P55073 304 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 RPL38P63173 70 aaKnown RBP16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 INSM1Q01101 510 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms