RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 OR8K5Q8NH50 307 aa16.9■□□□□ 0.3
MCF2L-208ENST00000397030 POP5Q969H6 163 aaKnown RBP16.9■□□□□ 0.3
MCF2L-208ENST00000397030 SHMT2P34897 504 aa16.9■□□□□ 0.3
MCF2L-208ENST00000397030 PITPNAQ00169 270 aa16.9■□□□□ 0.3
MCF2L-208ENST00000397030 PPP1R14DQ9NXH3 145 aa16.9■□□□□ 0.3
MCF2L-208ENST00000397030 OR2AT4A6NND4 320 aa16.9■□□□□ 0.3
MCF2L-208ENST00000397030 SIX3O95343 332 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-208ENST00000397030 GJB5O95377 273 aa16.9■□□□□ 0.3
MCF2L-208ENST00000397030 MRPL3P09001 348 aaKnown RBP16.9■□□□□ 0.3
MCF2L-208ENST00000397030 TRABD2AQ86V40 505 aa16.9■□□□□ 0.3
MCF2L-208ENST00000397030 OR10G2Q8NGC3 310 aa16.9■□□□□ 0.3
MCF2L-208ENST00000397030 PCDH19Q8TAB3 1148 aa16.9■□□□□ 0.3
MCF2L-208ENST00000397030 RBP7Q96R05 134 aa16.9■□□□□ 0.3
MCF2L-208ENST00000397030 UHRF1Q96T88 793 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-208ENST00000397030 PIGVQ9NUD9 493 aa16.9■□□□□ 0.3
MCF2L-208ENST00000397030 TEX13DA0A0J9YY54 714 aaPredicted RBP16.89■□□□□ 0.3
MCF2L-208ENST00000397030 KDM4BO94953 1096 aa16.89■□□□□ 0.3
MCF2L-208ENST00000397030 C6orf47O95873 294 aa16.89■□□□□ 0.3
MCF2L-208ENST00000397030 DEFB133Q30KQ1 61 aa16.89■□□□□ 0.3
MCF2L-208ENST00000397030 FAM214AQ32MH5 1076 aa16.89■□□□□ 0.3
MCF2L-208ENST00000397030 SLC35F1Q5T1Q4 408 aa16.89■□□□□ 0.3
MCF2L-208ENST00000397030 PLET1Q6UQ28 207 aa16.89■□□□□ 0.3
MCF2L-208ENST00000397030 ZBTB8BQ8NAP8 495 aaPredicted RBP16.89■□□□□ 0.3
MCF2L-208ENST00000397030 DIO2Q92813 273 aa16.89■□□□□ 0.3
MCF2L-208ENST00000397030 ALPK1Q96QP1 1244 aa16.89■□□□□ 0.3
MCF2L-208ENST00000397030 IL4I1Q96RQ9 567 aa16.89■□□□□ 0.3
MCF2L-208ENST00000397030 TMEM209Q96SK2 561 aa16.89■□□□□ 0.3
MCF2L-208ENST00000397030 TTYH3Q9C0H2 523 aa16.89■□□□□ 0.3
MCF2L-208ENST00000397030 RMI1Q9H9A7 625 aa16.89■□□□□ 0.3
MCF2L-208ENST00000397030 VNN1O95497 513 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 CNOT4O95628 575 aaKnown RBP16.89■□□□□ 0.29
MCF2L-208ENST00000397030 GNRHRP30968 328 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 LASP1Q14847 261 aaKnown RBP16.89■□□□□ 0.29
MCF2L-208ENST00000397030 NSMAFQ92636 917 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 CCDC28BQ9BUN5 200 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 POLDIP3Q9BY77 421 aaKnown RBP16.89■□□□□ 0.29
MCF2L-208ENST00000397030 RHCGQ9UBD6 479 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 OR1A2Q9Y585 309 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 LATO43561 262 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 GADD45AP24522 165 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 GJA8P48165 433 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 ZER1Q7Z7L7 766 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 LENG8Q96PV6 779 aaPredicted RBP16.89■□□□□ 0.29
MCF2L-208ENST00000397030 B4GALT6Q9UBX8 382 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 TTKP33981 857 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 GLP1RP43220 463 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 PTPRCAPQ14761 206 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 OGFOD2Q6N063 350 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 GOLGA7Q7Z5G4 137 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 AGAP11Q8TF27 550 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 KCTD13Q8WZ19 329 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 BCAS3Q9H6U6 928 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 C8orf33Q9H7E9 229 aaPredicted RBP16.89■□□□□ 0.29
MCF2L-208ENST00000397030 LOC730098B7Z3J9 87 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 GABRDO14764 452 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 IFNA21P01568 189 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 BCKDHAP12694 445 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 TAS2R39P59534 338 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 GPRC6AQ5T6X5 926 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 OR8S1Q8NH09 359 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 LRRC58Q96CX6 371 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 CPNE2Q96FN4 548 aaPredicted RBP16.89■□□□□ 0.29
MCF2L-208ENST00000397030 KCTD3Q9Y597 815 aa16.89■□□□□ 0.29
MCF2L-208ENST00000397030 EPHA4P54764 986 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 POU6F2P78424 691 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-208ENST00000397030 DLX2Q07687 328 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-208ENST00000397030 FRG2Q64ET8 278 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 DCUN1D3Q8IWE4 304 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 CCDC116Q8IYX3 515 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 OR6N2Q8NGY6 317 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 OR2L2Q8NH16 312 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 FRG2BQ96QU4 278 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 ZNF700Q9H0M5 742 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 RBM47A0AV96 593 aaKnown RBP16.88■□□□□ 0.29
MCF2L-208ENST00000397030 CD72P21854 359 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 IDH3AP50213 366 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 TMIGD1Q6UXZ0 262 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 ZNF599Q96NL3 588 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 RNPEPL1Q9HAU8 725 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 PCDHB10Q9UN67 800 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 MAP2K7O14733 419 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 HRGP04196 525 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 DLDP09622 509 aaKnown RBP16.88■□□□□ 0.29
MCF2L-208ENST00000397030 OLIG2Q13516 323 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 TIGD6Q17RP2 521 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 KIAA0895LQ68EN5 471 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 FBXL16Q8N461 479 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 FAM86B1Q8N7N1 296 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 SMARCD2Q92925 531 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 TMCO6Q96DC7 493 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 FZD8Q9H461 694 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 MINDY3Q9H8M7 445 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 Q9Y3F1 56 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 AIREO43918 545 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 GGT2P36268 569 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 ZNF805Q5CZA5 627 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 TMEM198Q66K66 360 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 ASB18Q6ZVZ8 466 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 AKAP14Q86UN6 197 aa16.88■□□□□ 0.29
MCF2L-208ENST00000397030 OSTM1Q86WC4 334 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms