RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 RTP2Q5QGT7 225 aa23.14■■□□□ 1.29
CSNK1E-203ENST00000396832 EIF3MQ7L2H7 374 aaKnown RBP23.14■■□□□ 1.29
CSNK1E-203ENST00000396832 CEP295NLQ96MC4 621 aa23.14■■□□□ 1.29
CSNK1E-203ENST00000396832 MGLLQ99685 303 aa23.14■■□□□ 1.29
CSNK1E-203ENST00000396832 KCNK5O95279 499 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 CLDN9O95484 217 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 CD9P21926 228 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 CLDN8P56748 225 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 NFATC2Q13469 925 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 ZXDCQ2QGD7 858 aaPredicted RBP23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 TIMM50Q3ZCQ8 353 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 ANGPTL8Q6UXH0 198 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 TMPRSS11AQ6ZMR5 421 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 CBLL1Q75N03 491 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 BPHLQ86WA6 291 aaPredicted RBP23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 TMEM173Q86WV6 379 aaPredicted RBP23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 ZZZ3Q8IYH5 903 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 CHCHD4Q8N4Q1 142 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 SNAPC3Q92966 411 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 FEVQ99581 238 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 CNPPD1Q9BV87 410 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 IL26Q9NPH9 171 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 ZNF226Q9NYT6 803 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 DNMT3LQ9UJW3 386 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 NINQ8N4C6 2090 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 OR6C70A6NIJ9 312 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 CLIC1O00299 241 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 FPGTO14772 594 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 ZNF79Q15937 498 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 ATCAYQ86WG3 371 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 CCDC28AQ8IWP9 274 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 EPYCQ99645 322 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 ATG10Q9H0Y0 220 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 ABCB8Q9NUT2 735 aa23.13■■□□□ 1.29
CSNK1E-203ENST00000396832 CCDC182A6NF36 153 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 C12orf71A8MTZ7 269 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 ADAM12O43184 909 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 COCHO43405 550 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 GPX5O75715 221 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 DGKAP23743 735 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 RPS19P39019 145 aaKnown RBP23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 PRIM2P49643 509 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 DSC1Q08554 894 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 HSPA14Q0VDF9 509 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 CHRNA6Q15825 494 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 ZNF367Q7RTV3 350 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 TAS1R1Q7RTX1 841 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 TSPAN33Q86UF1 283 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 UBASH3BQ8TF42 649 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 COQ7Q99807 217 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 TMEM184CQ9NVA4 438 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 MS4A12Q9NXJ0 267 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 MBD1Q9UIS9 605 aaPredicted RBP23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 RPIAP49247 311 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 HYAL2Q12891 473 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 IQCCQ4KMZ1 466 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 CXorf57Q6NSI4 855 aaKnown RBP23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 NCEH1Q6PIU2 408 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 TRIM48Q8IWZ4 208 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 PGBD3Q8N328 593 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 WFDC5Q8TCV5 224 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 UTP15Q8TED0 518 aaKnown RBP23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 LINC01599Q8WXQ3 324 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 DHRS9Q9BPW9 319 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 BARHL1Q9BZE3 327 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 EXOSC4Q9NPD3 245 aaKnown RBP23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 CCDC88CQ9P219 2028 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 SLC38A8A6NNN8 435 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 ZNF780AO75290 641 aaPredicted RBP23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 WDR47O94967 919 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 EBLN1P0CF75 366 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 HMGCLP35914 325 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 DMC1Q14565 340 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 TOR1AIP1Q5JTV8 583 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 C19orf48Q6RUI8 117 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 ANKS3Q6ZW76 656 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 FAM124AQ86V42 546 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 LAX1Q8IWV1 398 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 CACTIN-AS1Q8N1I8 211 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 B3GNT7Q8NFL0 401 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 COQ8BQ96D53 544 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 MYO19Q96H55 970 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 ASPNQ9BXN1 380 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 ZNF717Q9BY31 904 aaPredicted RBP23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 MKRN2Q9H000 416 aaKnown RBP23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 ZFYVE1Q9HBF4 777 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 PCDHB1Q9Y5F3 818 aa23.12■■□□□ 1.29
CSNK1E-203ENST00000396832 SMAD6O43541 496 aaKnown RBP23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 CLDN11O75508 207 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 POU2F1P14859 743 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 FCHO2Q0JRZ9 810 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 EIF4HQ15056 248 aaKnown RBP23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 KCNA10Q16322 511 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 SYCE2Q6PIF2 218 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 RNF130Q86XS8 419 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 IQCF2Q8IXL9 164 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 RBFAQ8N0V3 343 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 FAM109AQ8N4B1 249 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 ANKK1Q8NFD2 765 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 USP7Q93009 1102 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms