RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 SF1Q15637 639 aaKnown RBP9.85□□□□□ -0.83
NEDD8-202ENST00000396828 CYP2A13Q16696 494 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 FIGLAQ6QHK4 219 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 TMEM207Q6UWW9 146 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 MAMDC2Q7Z304 686 aaPredicted RBP9.85□□□□□ -0.83
NEDD8-202ENST00000396828 PARP9Q8IXQ6 854 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 SPATA6LQ8N4H0 392 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 ARMC2Q8NEN0 867 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 GIMAP7Q8NHV1 300 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 DENND1AQ8TEH3 1009 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 EEF1AKMT1Q8WVE0 214 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 SKA2Q8WVK7 121 aaPredicted RBP9.85□□□□□ -0.83
NEDD8-202ENST00000396828 ANKRD49Q8WVL7 239 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 PDLIM5Q96HC4 596 aaKnown RBP9.85□□□□□ -0.83
NEDD8-202ENST00000396828 ZNF285Q96NJ3 590 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 SLC30A3Q99726 388 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 SLC29A3Q9BZD2 475 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 MRPL46Q9H2W6 279 aaKnown RBP9.85□□□□□ -0.83
NEDD8-202ENST00000396828 CUTCQ9NTM9 273 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 TSR3Q9UJK0 312 aaKnown RBP9.85□□□□□ -0.83
NEDD8-202ENST00000396828 AKAP9Q99996 3911 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 PDZD2O15018 2839 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 LOC105369274A0A096LPK9 316 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 LOC102723532A0A0G2JNH3 316 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 PABPN1LA6NDY0 278 aaKnown RBP9.84□□□□□ -0.83
NEDD8-202ENST00000396828 VSTM2BA6NLU5 285 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 SYCE1LA8MT33 242 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 E2F3O00716 465 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 DSCR3O14972 297 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 BIRC5O15392 142 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 KLHL18O94889 574 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 SLCO2B1O94956 709 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 C1orf105O95561 183 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 PROCP04070 461 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 ALPPP05187 535 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 MYL2P10916 166 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 CPA3P15088 417 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 CD1DP15813 335 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 TFEBP19484 476 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 MDH1P40925 334 aaKnown RBP9.84□□□□□ -0.83
NEDD8-202ENST00000396828 BDKRB1P46663 353 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 SRSF11Q05519 484 aaKnown RBP9.84□□□□□ -0.83
NEDD8-202ENST00000396828 DLG1Q12959 904 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 AIMP2Q13155 320 aaKnown RBP9.84□□□□□ -0.83
NEDD8-202ENST00000396828 FASTKQ14296 549 aaKnown RBP9.84□□□□□ -0.83
NEDD8-202ENST00000396828 ACSBG2Q5FVE4 666 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 PRAMEF13Q5VWM6 474 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 IGFL2Q6UWQ7 119 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 NEK10Q6ZWH5 1172 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 DCUN1D3Q8IWE4 304 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 TRIM42Q8IWZ5 723 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 OR4N4Q8N0Y3 316 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 SHISA5Q8N114 240 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 ZADH2Q8N4Q0 377 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 CATSPER1Q8NEC5 780 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 OR11G2Q8NGC1 345 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 OR2L8Q8NGY9 312 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 RHEBL1Q8TAI7 183 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 STAG3L4Q8TBR4 150 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 KIAA1191Q96A73 305 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 GPR78Q96P69 363 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 CAPS2Q9BXY5 557 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 SLC26A1Q9H2B4 701 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 ZNF358Q9NW07 568 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 CPSF2Q9P2I0 782 aaKnown RBP9.84□□□□□ -0.83
NEDD8-202ENST00000396828 XPR1Q9UBH6 696 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 RNF112Q9ULX5 631 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 SLC5A6Q9Y289 635 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 SVILO95425 2214 aa9.84□□□□□ -0.83
NEDD8-202ENST00000396828 DIDO1Q9BTC0 2240 aaKnown RBP9.84□□□□□ -0.83
NEDD8-202ENST00000396828 CELSR1Q9NYQ6 3014 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 A0A0J9YVX5 310 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 A0A1W2PPV9 198 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 FITM1A5D6W6 292 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 FFAR3O14843 346 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 GPR42O15529 346 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 ZBTB14O43829 449 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 SMIM24O75264 130 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 TSPAN12O95859 305 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 ALBP02768 609 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 S100BP04271 92 aaPredicted RBP9.83□□□□□ -0.84
NEDD8-202ENST00000396828 C8GP07360 202 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 CD63P08962 238 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 MPC1LP0DKB6 136 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 VARSP26640 1264 aaKnown RBP9.83□□□□□ -0.84
NEDD8-202ENST00000396828 GMPRP36959 345 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 ETV4P43268 484 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 SERPINB4P48594 390 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 ARSFP54793 590 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 GYS2P54840 703 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 VSX2P58304 361 aaPredicted RBP9.83□□□□□ -0.84
NEDD8-202ENST00000396828 SNRPNP63162 240 aaKnown RBP9.83□□□□□ -0.84
NEDD8-202ENST00000396828 GUCY1A3Q02108 690 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 ASPHQ12797 758 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 VWA2Q5GFL6 755 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 TECRLQ5HYJ1 363 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 WASHC2DQ5SRD0 308 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 FBXO42Q6P3S6 717 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 UNC5DQ6UXZ4 953 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 LINC00696Q6ZRV3 163 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms