RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 MOSPD2Q8NHP6 518 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.16□□□□□ -1.11e-9■■■■■ 31.4
NDE1-202ENST00000396355 ELP4Q96EB1 424 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 TMEM80Q96HE8 168 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 TMEM176AQ96HP8 235 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 QRFPRQ96P65 431 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 GAL3ST4Q96RP7 486 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 VRK1Q99986 396 aaPredicted RBP8.16□□□□□ -1.1
NDE1-202ENST00000396355 FSD1LQ9BXM9 530 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 SMURF1Q9HCE7 757 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 TNFRSF10DQ9UBN6 386 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 DLGAP4Q9Y2H0 992 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 TCRBV16S1A1N1A0A5B0 115 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 RRN3P2A6NIE6 340 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 RFXAPO00287 272 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 ATG13O75143 517 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 H2AFYO75367 372 aaKnown RBP8.16□□□□□ -1.1
NDE1-202ENST00000396355 ALDOBP05062 364 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 JUNP05412 331 aaKnown RBP8.16□□□□□ -1.1
NDE1-202ENST00000396355 RETP07949 1114 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 STAG3L1P0CL83 205 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 RFC2P35250 354 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 ETV5P41161 510 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 HCAR3P49019 387 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 GLUD2P49448 558 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 ZNF143P52747 638 aaPredicted RBP8.16□□□□□ -1.1
NDE1-202ENST00000396355 SNRPEP62304 92 aaKnown RBP8.16□□□□□ -1.1
NDE1-202ENST00000396355 RNF4P78317 190 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 DDX39BQ13838 428 aaKnown RBP8.16□□□□□ -1.1
NDE1-202ENST00000396355 YIF1BQ5BJH7 314 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 ZMAT1Q5H9K5 638 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 IKBIPQ70UQ0 350 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 ZNF534Q76KX8 674 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 EPHX4Q8IUS5 362 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 CMIPQ8IY22 773 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 DENND6BQ8NEG7 585 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 KHSRPQ92945 711 aaKnown RBP eCLIP8.16□□□□□ -1.1
NDE1-202ENST00000396355 ZNF778Q96MU6 729 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 KCNC2Q96PR1 638 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 HOPXQ9BPY8 73 aaPredicted RBP8.16□□□□□ -1.1
NDE1-202ENST00000396355 PBX4Q9BYU1 374 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 C11orf54Q9H0W9 315 aaPredicted RBP8.16□□□□□ -1.1
NDE1-202ENST00000396355 MUC13Q9H3R2 512 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 ANKRA2Q9H9E1 313 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 ANKHQ9HCJ1 492 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 POT1Q9NUX5 634 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 KLK14Q9P0G3 267 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 INTS6Q9UL03 887 aaKnown RBP8.16□□□□□ -1.1
NDE1-202ENST00000396355 HMX2A2RU54 273 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 LCHNA4D1U4 455 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 CARNS1A5YM72 827 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 HCRTO43612 131 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 C22orf31O95567 290 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 VIPP01282 170 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 CLUP10909 449 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 CD72P21854 359 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 MAGEA12P43365 314 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 HK3P52790 923 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 TFF2Q03403 129 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 EXOSC2Q13868 293 aaKnown RBP8.15□□□□□ -1.1
NDE1-202ENST00000396355 TRAM2Q15035 370 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 FCN2Q15485 313 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 HKDC1Q2TB90 917 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 TEX44Q53QW1 395 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 SLC6A19Q695T7 634 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 PMF1Q6P1K2 205 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 NLRP8Q86W28 1048 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 PDZD9Q8IXQ8 264 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 ZNF454Q8N9F8 522 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 KDM1BQ8NB78 822 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 CLRN3Q8NCR9 226 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 ULK4Q96C45 1275 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 MYO19Q96H55 970 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 CHRDQ9H2X0 955 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 RHBGQ9H310 441 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 PDZD7Q9H5P4 517 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 POPDC2Q9HBU9 364 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 ZFP14Q9HCL3 533 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 ACOXLQ9NUZ1 547 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 TSPAN16Q9UKR8 245 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 MYO7AQ13402 2215 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 ARPC5O15511 151 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 PI15O43692 258 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 SNNO75324 88 aaPredicted RBP8.15□□□□□ -1.1
NDE1-202ENST00000396355 PMPCBO75439 489 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 STSP08842 583 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 S100PP25815 95 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 NDST1P52848 882 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 BLOC1S1P78537 153 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 TTLL4Q14679 1199 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 PFKFB4Q16877 469 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 CRTC2Q53ET0 693 aaPredicted RBP8.15□□□□□ -1.1
NDE1-202ENST00000396355 USP39Q53GS9 565 aaKnown RBP8.15□□□□□ -1.1
NDE1-202ENST00000396355 ANKRD34AQ69YU3 496 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 FSTL4Q6MZW2 842 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 ZNF551Q7Z340 670 aaPredicted RBP8.15□□□□□ -1.1
NDE1-202ENST00000396355 STK40Q8N2I9 435 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 OR4Q3Q8NH05 313 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 FBXO17Q96EF6 278 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 RNF157Q96PX1 679 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms