RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 EN2P19622 333 aaPredicted RBP5.17□□□□□ -1.58
VPS41-203ENST00000395969 HTR1EP28566 365 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 PKLRP30613 574 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 GZMMP51124 257 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 MRPS21P82921 87 aaKnown RBP5.17□□□□□ -1.58
VPS41-203ENST00000395969 HYAL1Q12794 435 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 CSHL1Q14406 222 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 LY6G5CQ5SRR4 150 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 SPOUT1Q5T280 376 aaKnown RBP5.17□□□□□ -1.58
VPS41-203ENST00000395969 AGAP6Q5VW22 663 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 STEAP3Q658P3 488 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 GRHL2Q6ISB3 625 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 LAIR2Q6ISS4 152 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 OTOP2Q7RTS6 562 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 SYVN1Q86TM6 617 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 SLC51BQ86UW2 128 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 RETREG3Q86VR2 466 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 GATAD2AQ86YP4 633 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 TBC1D21Q8IYX1 336 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 OR8H2Q8N162 312 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 SYNPOQ8N3V7 929 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 CHDHQ8NE62 594 aaPredicted RBP5.17□□□□□ -1.58
VPS41-203ENST00000395969 OR7A2PQ8NGA2 310 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 OR2L2Q8NH16 312 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 GLYATL1Q969I3 302 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 ASIC4Q96FT7 647 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 DMRTB1Q96MA1 342 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 DACH2Q96NX9 599 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 AGAP4Q96P64 663 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 COPS8Q99627 209 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 TIMM29Q9BSF4 260 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 CCM2Q9BSQ5 444 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 C1QTNF2Q9BXJ5 285 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 ZCCHC2Q9C0B9 1178 aaKnown RBP5.17□□□□□ -1.58
VPS41-203ENST00000395969 B3GNT4Q9C0J1 378 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 CHRNA10Q9GZZ6 450 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 ABCG8Q9H221 673 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 CLMPQ9H6B4 373 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 SLA2Q9H6Q3 261 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 C8orf33Q9H7E9 229 aaPredicted RBP5.17□□□□□ -1.58
VPS41-203ENST00000395969 ZDHHC4Q9NPG8 344 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 HCFC1R1Q9NWW0 138 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 CCDC167Q9P0B6 97 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 CLEC1BQ9P126 229 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 MAP10Q9P2G4 905 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 K7ERQ8 282 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 UPK1AO00322 258 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 ARPC2O15144 300 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 UBDO15205 165 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 B3GALNT1O75752 331 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 ALPLP05186 524 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 PRPS2P11908 318 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 CA5AP35218 305 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 FRKP42685 505 aaPredicted RBP5.17□□□□□ -1.58
VPS41-203ENST00000395969 CTSOP43234 321 aaPredicted RBP5.17□□□□□ -1.58
VPS41-203ENST00000395969 ALDH3A2P51648 485 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 LSM3P62310 102 aaKnown RBP5.17□□□□□ -1.58
VPS41-203ENST00000395969 HTR4Q13639 388 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 PDE7AQ13946 482 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 HABP4Q5JVS0 413 aaKnown RBP5.17□□□□□ -1.58
VPS41-203ENST00000395969 C6orf141Q5SZD1 244 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 ATAD3CQ5T2N8 411 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 FAM46CQ5VWP2 391 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 DESI1Q6ICB0 168 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 FAM180BQ6P0A1 224 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 GPRIN3Q6ZVF9 776 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 GOLGA7Q7Z5G4 137 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 THNSL2Q86YJ6 484 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 RNF135Q8IUD6 432 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 ELMOD2Q8IZ81 293 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 SVOPQ8N4V2 548 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 PTGR2Q8N8N7 351 aaPredicted RBP5.17□□□□□ -1.58
VPS41-203ENST00000395969 EEF1AKMT1Q8WVE0 214 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 TWIST2Q8WVJ9 160 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 AUTS2Q8WXX7 1259 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 OR8D1Q8WZ84 308 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 FIG4Q92562 907 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 MTERF3Q96E29 417 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 CMTM7Q96FZ5 175 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 AURKBQ96GD4 344 aaPredicted RBP5.17□□□□□ -1.58
VPS41-203ENST00000395969 LRCH3Q96II8 777 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 RDH12Q96NR8 316 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 TNKS2Q9H2K2 1166 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 MAGIXQ9H6Y5 334 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 GORASP2Q9H8Y8 452 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 PELI2Q9HAT8 420 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 GULP1Q9UBP9 304 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 B4GALT6Q9UBX8 382 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 WARS2Q9UGM6 360 aaKnown RBP5.17□□□□□ -1.58
VPS41-203ENST00000395969 OSGIN1Q9UJX0 560 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 ZNF221Q9UK13 617 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 ADAM29Q9UKF5 820 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 PDE10AQ9Y233 779 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 ACTL7AQ9Y615 435 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 PRSS21Q9Y6M0 314 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 PABPN1LA6NDY0 278 aaKnown RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 A8MVJ9 347 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ZNF99A8MXY4 864 aaPredicted RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 PRRT4C9JH25 899 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ERVH48-1M5A8F1 160 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms