RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 STX16O14662 325 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 PRPF4O43172 522 aaKnown RBP eCLIP15.73■□□□□ 0.11
CXCL1-201ENST00000395761 DLX3O60479 287 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 KLF7O75840 302 aaPredicted RBP15.73■□□□□ 0.11
CXCL1-201ENST00000395761 WFS1O76024 890 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 AHRP35869 848 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 CASP2P42575 452 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 IRF8Q02556 426 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 HYAL2Q12891 473 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 PWP1Q13610 501 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 IL10RAQ13651 578 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 GTF2H2Q13888 395 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 ADNP2Q6IQ32 1131 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 GTF2H2CQ6P1K8 395 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 PRMT9Q6P2P2 845 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 TMIGD1Q6UXZ0 262 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 RPS27LQ71UM5 84 aaKnown RBP15.73■□□□□ 0.11
CXCL1-201ENST00000395761 OVCH1Q7RTY7 1134 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 GOLGA7Q7Z5G4 137 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.73■□□□□ 0.11
CXCL1-201ENST00000395761 SHISA5Q8N114 240 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 KRT78Q8N1N4 520 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 OR9A4Q8NGU2 314 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 ZCCHC10Q8TBK6 192 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 CREB3L4Q8TEY5 395 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 APOPT1Q96IL0 206 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 DRC3Q9H069 523 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 NT5DC2Q9H857 520 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 ZNF304Q9HCX3 659 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 ACSS2Q9NR19 701 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 COPG2Q9UBF2 871 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 CTSFQ9UBX1 484 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 TMCO1Q9UM00 188 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 ANGPTL3Q9Y5C1 460 aa15.73■□□□□ 0.11
CXCL1-201ENST00000395761 TNPO3Q9Y5L0 923 aaKnown RBP15.73■□□□□ 0.11
CXCL1-201ENST00000395761 CDC14CA4D256 554 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 A8MT66 165 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 FFAR3O14843 346 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 GPR42O15529 346 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 B3GALT4O96024 378 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 SLC35G6P0C7Q6 338 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 HNF4AP41235 474 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 MC1RQ01726 317 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 PCDH1Q08174 1060 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 CDC20Q12834 499 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 FAM53BQ14153 422 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 E2F2Q14209 437 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 TBCCQ15814 346 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 NDUFA9Q16795 377 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 HSP90B2PQ58FF3 399 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 VN1R5Q7Z5H4 357 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 AMER3Q8N944 861 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 NT5CQ8TCD5 201 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 MMABQ96EY8 250 aaPredicted RBP15.72■□□□□ 0.11
CXCL1-201ENST00000395761 NSUN5Q96P11 429 aaKnown RBP15.72■□□□□ 0.11
CXCL1-201ENST00000395761 EFCAB11Q9BUY7 163 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 AICDAQ9GZX7 198 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 KLHL31Q9H511 634 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 IPPKQ9H8X2 491 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 PLLPQ9Y342 182 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 PTRH2Q9Y3E5 179 aaKnown RBP15.72■□□□□ 0.11
CXCL1-201ENST00000395761 MGAQ8IWI9 3026 aa15.72■□□□□ 0.11
CXCL1-201ENST00000395761 NBEAQ8NFP9 2946 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 OR7A17O14581 309 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 TBX6O95947 436 aaPredicted RBP15.71■□□□□ 0.11
CXCL1-201ENST00000395761 PIM1P11309 404 aaPredicted RBP15.71■□□□□ 0.11
CXCL1-201ENST00000395761 IL1RNP18510 177 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 TAC1P20366 129 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 FBLP22087 321 aaKnown RBP15.71■□□□□ 0.11
CXCL1-201ENST00000395761 MAT1AQ00266 395 aaKnown RBP15.71■□□□□ 0.11
CXCL1-201ENST00000395761 RGS1Q08116 209 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 LAPTM5Q13571 262 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 NKG7Q16617 165 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 SYT16Q17RD7 645 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 CCDC153Q494R4 210 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 METTL2BQ6P1Q9 378 aaKnown RBP15.71■□□□□ 0.11
CXCL1-201ENST00000395761 SHISA6Q6ZSJ9 500 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 SYVN1Q86TM6 617 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 PDSS2Q86YH6 399 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 TRPV3Q8NET8 790 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 FKBP10Q96AY3 582 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 MVB12AQ96EY5 273 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 C17orf62Q9BQA9 187 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 FAM117AQ9C073 453 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 SLC6A16Q9GZN6 736 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 PITHD1Q9GZP4 211 aaPredicted RBP15.71■□□□□ 0.11
CXCL1-201ENST00000395761 SLC26A1Q9H2B4 701 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 NOL11Q9H8H0 719 aaKnown RBP15.71■□□□□ 0.11
CXCL1-201ENST00000395761 PCTPQ9UKL6 214 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 CDC14AQ9UNH5 594 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 SLC22A7Q9Y694 548 aa15.71■□□□□ 0.11
CXCL1-201ENST00000395761 VSTM2BA6NLU5 285 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 C4orf51C9J302 202 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 G3V2L1 256 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 SGK494L7N484 410 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 PPP6CO00743 305 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 TM9SF1O15321 606 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 DNAJB6O75190 326 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 SPAG7O75391 227 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 NSA2O95478 260 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms