RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 KDM1AO60341 852 aa14.33□□□□□ -0.12
CCT4-201ENST00000394440 GGT1P19440 569 aa14.33□□□□□ -0.12
CCT4-201ENST00000394440 NUDT1P36639 197 aa14.33□□□□□ -0.12
CCT4-201ENST00000394440 HPCAL1P37235 193 aa14.33□□□□□ -0.12
CCT4-201ENST00000394440 LRRC36Q1X8D7 754 aa14.33□□□□□ -0.12
CCT4-201ENST00000394440 SFT2D3Q587I9 215 aa14.33□□□□□ -0.12
CCT4-201ENST00000394440 ANKRD26P1Q6NSI1 321 aa14.33□□□□□ -0.12
CCT4-201ENST00000394440 SLC30A9Q6PML9 568 aa14.33□□□□□ -0.12
CCT4-201ENST00000394440 PHACTR4Q8IZ21 702 aa14.33□□□□□ -0.12
CCT4-201ENST00000394440 C10orf111Q8N326 155 aa14.33□□□□□ -0.12
CCT4-201ENST00000394440 OR10A6Q8NH74 314 aa14.33□□□□□ -0.12
CCT4-201ENST00000394440 AURKBQ96GD4 344 aaPredicted RBP14.33□□□□□ -0.12
CCT4-201ENST00000394440 GBP5Q96PP8 586 aa14.33□□□□□ -0.12
CCT4-201ENST00000394440 THUMPD3Q9BV44 507 aaKnown RBP14.33□□□□□ -0.12
CCT4-201ENST00000394440 PIF1Q9H611 641 aa14.33□□□□□ -0.12
CCT4-201ENST00000394440 SPHK1Q9NYA1 384 aa14.33□□□□□ -0.12
CCT4-201ENST00000394440 WNT16Q9UBV4 365 aa14.33□□□□□ -0.12
CCT4-201ENST00000394440 KLF15Q9UIH9 416 aa14.33□□□□□ -0.12
CCT4-201ENST00000394440 A0A1W2PPC4 97 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 ZNF217O75362 1048 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 GSNP06396 782 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 GPIP06744 558 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 TPP2P29144 1249 aaPredicted RBP14.32□□□□□ -0.12
CCT4-201ENST00000394440 SHMT2P34897 504 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 SLC19A1P41440 591 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 ABATP80404 500 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 TCEA2Q15560 299 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 ZNF385BQ569K4 471 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 FAM71E1Q6IPT2 247 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 OR2T12Q8NG77 320 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 OR2L3Q8NG85 312 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 GPBAR1Q8TDU6 330 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 C16orf78Q8WTQ4 265 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 SARGQ9BW04 601 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 REEP4Q9H6H4 257 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 CAAP1Q9H8G2 361 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 OR6C2Q9NZP2 312 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 BTNL2Q9UIR0 455 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 TRBC2A0A5B9 178 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 LCMT2O60294 686 aaKnown RBP14.32□□□□□ -0.12
CCT4-201ENST00000394440 GBAP04062 536 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 CYP4F2P78329 520 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 EIF2B5Q13144 721 aaKnown RBP14.32□□□□□ -0.12
CCT4-201ENST00000394440 UBXN2BQ14CS0 331 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 PUS10Q3MIT2 529 aaKnown RBP14.32□□□□□ -0.12
CCT4-201ENST00000394440 CPTPQ5TA50 214 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 GLYATQ6IB77 296 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 HMBOX1Q6NT76 420 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 CLECL1Q8IZS7 167 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 FBXL6Q8N531 539 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 ADCY4Q8NFM4 1077 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 LRTOMTQ8WZ04 291 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 PHF12Q96QT6 1004 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 EFHD1Q9BUP0 239 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 TPSD1Q9BZJ3 242 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 FOXQ1Q9C009 403 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 PRM3Q9NNZ6 103 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 MRPS30Q9NP92 439 aaKnown RBP14.32□□□□□ -0.12
CCT4-201ENST00000394440 GMEB1Q9Y692 573 aa14.32□□□□□ -0.12
CCT4-201ENST00000394440 MUC3AQ02505 3323 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 SPTY2D1-AS1A0A0U1RR47 76 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 FAM220BPB1ANY3 271 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 FURINP09958 794 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 UMPSP11172 480 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 BSGP35613 385 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 SLC14A1Q13336 389 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 IKBIPQ70UQ0 350 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 ZNF551Q7Z340 670 aaPredicted RBP14.31□□□□□ -0.12
CCT4-201ENST00000394440 AMIGO1Q86WK6 493 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 PAPD5Q8NDF8 572 aaKnown RBP14.31□□□□□ -0.12
CCT4-201ENST00000394440 CREB3L4Q8TEY5 395 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 RLN3Q8WXF3 142 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 PANX1Q96RD7 426 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 BHLHE41Q9C0J9 482 aaPredicted RBP14.31□□□□□ -0.12
CCT4-201ENST00000394440 LHX9Q9NQ69 397 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 TMEM184CQ9NVA4 438 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 INVSQ9Y283 1065 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 LRCH1Q9Y2L9 728 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 SLCO1B1Q9Y6L6 691 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 TDRD6O60522 2096 aaKnown RBP14.31□□□□□ -0.12
CCT4-201ENST00000394440 CEP192Q8TEP8 1941 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 EML5Q05BV3 1969 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 TNFRSF10AO00220 468 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 CLEC3AO75596 197 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 KLK1P06870 262 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 RPSAP08865 295 aaKnown RBP14.31□□□□□ -0.12
CCT4-201ENST00000394440 PSMA4P25789 261 aaKnown RBP14.31□□□□□ -0.12
CCT4-201ENST00000394440 SOX11P35716 441 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 ILF3Q12906 894 aaKnown RBP eCLIP14.31□□□□□ -0.122e-6■■■□□ 17.4
CCT4-201ENST00000394440 FZD2Q14332 565 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 ZNF425Q6IV72 752 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 ERMP1Q7Z2K6 904 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 FAM160A2Q8N612 972 aaPredicted RBP14.31□□□□□ -0.12
CCT4-201ENST00000394440 OR52E4Q8NGH9 312 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 JPH3Q8WXH2 748 aaPredicted RBP14.31□□□□□ -0.12
CCT4-201ENST00000394440 MTERF3Q96E29 417 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 NSMCE2Q96MF7 247 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 F2RL3Q96RI0 385 aa14.31□□□□□ -0.12
CCT4-201ENST00000394440 PRPF18Q99633 342 aaKnown RBP14.31□□□□□ -0.12
CCT4-201ENST00000394440 SORBS1Q9BX66 1292 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms