RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 ZNRF3Q9ULT6 936 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 IRS2Q9Y4H2 1338 aa13.05□□□□□ -0.32
USP49-203ENST00000394253 A8MV72 311 aaPredicted RBP13.04□□□□□ -0.32
USP49-203ENST00000394253 ZNF286BP0CG31 522 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 NCBP2P52298 156 aaKnown RBP eCLIP13.04□□□□□ -0.32
USP49-203ENST00000394253 POU4F2Q12837 409 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 NLRP8Q86W28 1048 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 LRRC46Q96FV0 321 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 DPCDQ9BVM2 203 aaPredicted RBP13.04□□□□□ -0.32
USP49-203ENST00000394253 GRHPRQ9UBQ7 328 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 PCDHGA2Q9Y5H1 932 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 F8VP50 259 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 SCAMP3O14828 347 aaKnown RBP13.04□□□□□ -0.32
USP49-203ENST00000394253 RFPL2O75678 378 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 CCR8P51685 355 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 SEC61A2Q9H9S3 476 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 RNF17Q9BXT8 1623 aaKnown RBP13.04□□□□□ -0.32
USP49-203ENST00000394253 KIAA2026Q5HYC2 2103 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 D6RAR5 112 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 H7C1Q1 480 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 IRF6O14896 467 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 ALOX15BO15296 676 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 B3GALNT1O75752 331 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 NFASCO94856 1347 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 DCNP07585 359 aaKnown RBP13.04□□□□□ -0.32
USP49-203ENST00000394253 HOXA9P31269 272 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 SLC22A25Q6T423 547 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 SLC15A3Q8IY34 581 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 MYO19Q96H55 970 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 HSFY1Q96LI6 401 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 UROC1Q96N76 676 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 LRRC7Q96NW7 1537 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 LENG8Q96PV6 779 aaPredicted RBP13.04□□□□□ -0.32
USP49-203ENST00000394253 ACBD6Q9BR61 282 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 UBE2J1Q9Y385 318 aaPredicted RBP13.04□□□□□ -0.32
USP49-203ENST00000394253 GLYATL1P3A0A0U1RQE8 302 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 MAGEB4O15481 346 aaPredicted RBP13.04□□□□□ -0.32
USP49-203ENST00000394253 FGF19O95750 216 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 NPPAP01160 153 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 SCNN1GP51170 649 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 SLC1A5Q15758 541 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 ARL13AQ5H913 290 aaPredicted RBP13.04□□□□□ -0.32
USP49-203ENST00000394253 MEDAGQ5VYS4 303 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 KDELC1Q6UW63 502 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 OR52E4Q8NGH9 312 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 HS6ST2Q96MM7 605 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 PPIL3Q9H2H8 161 aaKnown RBP13.04□□□□□ -0.32
USP49-203ENST00000394253 SIX4Q9UIU6 781 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 LRP5LA4QPB2 252 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 ENTPD3O75355 529 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 RDH16O75452 317 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 VIPP01282 170 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 AMHP03971 560 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 ENDOUP21128 410 aaKnown RBP13.04□□□□□ -0.32
USP49-203ENST00000394253 PLEKHG7Q6ZR37 379 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 SLC17A7Q9P2U7 560 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 AGAP14A8MT82 685 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 COQ9O75208 318 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 CLCQ05315 142 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 CAPSQ13938 189 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 HECTD2Q5U5R9 776 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 SLC35A5Q9BS91 424 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 A0A0A6YYH2 397 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 A6NJ64 397 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 TBL1XO60907 577 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 GTF2A2P52657 109 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 CSNK2A1P68400 391 aaPredicted RBP13.04□□□□□ -0.32
USP49-203ENST00000394253 HHIPL2Q6UWX4 724 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 LGI4Q8N135 537 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 CSNK2A3Q8NEV1 391 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 OR5B17Q8NGF7 314 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 DEDD2Q8WXF8 326 aa13.04□□□□□ -0.32
USP49-203ENST00000394253 CSF2P04141 144 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 FOXM1Q08050 763 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 CLEC6AQ6EIG7 209 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 RNF32Q9H0A6 362 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 DNAJC5Q9H3Z4 198 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 FBXW2Q9UKT8 454 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 NR4A2P43354 598 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 MPP7Q5T2T1 576 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 P4HA3Q7Z4N8 544 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 GALNT13Q8IUC8 556 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 RAB11FIP5Q9BXF6 653 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 ZNF850A8MQ14 1090 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 CIDEAO60543 219 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 CHRM5P08912 532 aaPredicted RBP13.03□□□□□ -0.32
USP49-203ENST00000394253 NSMAFQ92636 917 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 MSI2Q96DH6 328 aaKnown RBP13.03□□□□□ -0.32
USP49-203ENST00000394253 CNOT11Q9UKZ1 510 aaKnown RBP13.03□□□□□ -0.32
USP49-203ENST00000394253 OR1F1O43749 312 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 OXTRP30559 389 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 SPAM1P38567 509 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 CHRNA4P43681 627 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 AKR1C2P52895 323 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 ANKRD54Q6NXT1 300 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 SLC35F5Q8WV83 523 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 ZNF559Q9BR84 538 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 MIR1-1HGQ9H1L0 117 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 COL20A1Q9P218 1284 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 FRMPD1Q5SYB0 1578 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms