RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 ANKRD53Q8N9V6 530 aa29.1■■■□□ 2.25
CMTM4-202ENST00000394106 ESAMQ96AP7 390 aa29.1■■■□□ 2.25
CMTM4-202ENST00000394106 ACSS3Q9H6R3 686 aa29.1■■■□□ 2.25
CMTM4-202ENST00000394106 NMRAL1Q9HBL8 299 aa29.1■■■□□ 2.25
CMTM4-202ENST00000394106 LUZP4Q9P127 313 aa29.1■■■□□ 2.25
CMTM4-202ENST00000394106 H2AFYO75367 372 aaKnown RBP29.09■■■□□ 2.25
CMTM4-202ENST00000394106 LTA4HP09960 611 aaKnown RBP29.09■■■□□ 2.25
CMTM4-202ENST00000394106 C1GALT1C1LP0DN25 315 aa29.09■■■□□ 2.25
CMTM4-202ENST00000394106 ECHS1P30084 290 aa29.09■■■□□ 2.25
CMTM4-202ENST00000394106 XCR1P46094 333 aa29.09■■■□□ 2.25
CMTM4-202ENST00000394106 KCNC4Q03721 635 aa29.09■■■□□ 2.25
CMTM4-202ENST00000394106 HERC3Q15034 1050 aa29.09■■■□□ 2.25
CMTM4-202ENST00000394106 IGFBP7Q16270 282 aa29.09■■■□□ 2.25
CMTM4-202ENST00000394106 MINDY4Q4G0A6 757 aa29.09■■■□□ 2.25
CMTM4-202ENST00000394106 CDKL4Q5MAI5 379 aa29.09■■■□□ 2.25
CMTM4-202ENST00000394106 RBMXL3Q8N7X1 1067 aaKnown RBP29.09■■■□□ 2.25
CMTM4-202ENST00000394106 SNX31Q8N9S9 440 aa29.09■■■□□ 2.25
CMTM4-202ENST00000394106 STAG3L4Q8TBR4 150 aa29.09■■■□□ 2.25
CMTM4-202ENST00000394106 NT5CQ8TCD5 201 aa29.09■■■□□ 2.25
CMTM4-202ENST00000394106 IGSF5Q9NSI5 407 aa29.09■■■□□ 2.25
CMTM4-202ENST00000394106 DNAJC11Q9NVH1 559 aa29.09■■■□□ 2.25
CMTM4-202ENST00000394106 ACOT9Q9Y305 439 aa29.09■■■□□ 2.25
CMTM4-202ENST00000394106 TTLL8A6PVC2 850 aa29.08■■■□□ 2.25
CMTM4-202ENST00000394106 IPO13O94829 963 aaKnown RBP29.08■■■□□ 2.25
CMTM4-202ENST00000394106 ZNF888P0CJ79 500 aaPredicted RBP29.08■■■□□ 2.25
CMTM4-202ENST00000394106 GGT5P36269 586 aa29.08■■■□□ 2.25
CMTM4-202ENST00000394106 HNF4AP41235 474 aa29.08■■■□□ 2.25
CMTM4-202ENST00000394106 KCNC1P48547 511 aa29.08■■■□□ 2.25
CMTM4-202ENST00000394106 Q0VFX4 171 aa29.08■■■□□ 2.25
CMTM4-202ENST00000394106 DEFB134Q4QY38 66 aa29.08■■■□□ 2.25
CMTM4-202ENST00000394106 JMJD6Q6NYC1 403 aaPredicted RBP29.08■■■□□ 2.25
CMTM4-202ENST00000394106 SLCO4C1Q6ZQN7 724 aa29.08■■■□□ 2.25
CMTM4-202ENST00000394106 PDPRQ8NCN5 879 aa29.08■■■□□ 2.25
CMTM4-202ENST00000394106 THOC3Q96J01 351 aaKnown RBP29.08■■■□□ 2.25
CMTM4-202ENST00000394106 SNX15Q9NRS6 342 aa29.08■■■□□ 2.25
CMTM4-202ENST00000394106 NSG1A0A0A6YYJ2 146 aa29.07■■■□□ 2.24
CMTM4-202ENST00000394106 HMX2A2RU54 273 aa29.07■■■□□ 2.24
CMTM4-202ENST00000394106 SUPT3HB4E1H0 165 aa29.07■■■□□ 2.24
CMTM4-202ENST00000394106 SUPT3HO75486 399 aa29.07■■■□□ 2.24
CMTM4-202ENST00000394106 STK16O75716 305 aa29.07■■■□□ 2.24
CMTM4-202ENST00000394106 B3GALT4O96024 378 aa29.07■■■□□ 2.24
CMTM4-202ENST00000394106 COX6A1P12074 109 aa29.07■■■□□ 2.24
CMTM4-202ENST00000394106 IRF9Q00978 393 aa29.07■■■□□ 2.24
CMTM4-202ENST00000394106 SLBPQ14493 270 aaKnown RBP eCLIP29.07■■■□□ 2.24
CMTM4-202ENST00000394106 NDUFAF7Q7L592 441 aa29.07■■■□□ 2.24
CMTM4-202ENST00000394106 ISCA2Q86U28 154 aa29.07■■■□□ 2.24
CMTM4-202ENST00000394106 AFAP1L2Q8N4X5 818 aa29.07■■■□□ 2.24
CMTM4-202ENST00000394106 TRPV3Q8NET8 790 aa29.07■■■□□ 2.24
CMTM4-202ENST00000394106 KCTD4Q8WVF5 259 aa29.07■■■□□ 2.24
CMTM4-202ENST00000394106 NXNL1Q96CM4 212 aa29.07■■■□□ 2.24
CMTM4-202ENST00000394106 VN1R1Q9GZP7 353 aa29.07■■■□□ 2.24
CMTM4-202ENST00000394106 LHPPQ9H008 270 aa29.07■■■□□ 2.24
CMTM4-202ENST00000394106 CLMPQ9H6B4 373 aa29.07■■■□□ 2.24
CMTM4-202ENST00000394106 PTBP2Q9UKA9 531 aaKnown RBP29.07■■■□□ 2.24
CMTM4-202ENST00000394106 A0A087X1B8 175 aa29.06■■■□□ 2.24
CMTM4-202ENST00000394106 CCNT2O60583 730 aaKnown RBP29.06■■■□□ 2.24
CMTM4-202ENST00000394106 ALOX12P18054 663 aa29.06■■■□□ 2.24
CMTM4-202ENST00000394106 CD97P48960 835 aa29.06■■■□□ 2.24
CMTM4-202ENST00000394106 EFNA3P52797 238 aa29.06■■■□□ 2.24
CMTM4-202ENST00000394106 SLC6A19Q695T7 634 aa29.06■■■□□ 2.24
CMTM4-202ENST00000394106 ABHD13Q7L211 337 aa29.06■■■□□ 2.24
CMTM4-202ENST00000394106 OR5T3Q8NGG3 340 aa29.06■■■□□ 2.24
CMTM4-202ENST00000394106 METTL21AQ8WXB1 218 aa29.06■■■□□ 2.24
CMTM4-202ENST00000394106 CAPS2Q9BXY5 557 aa29.06■■■□□ 2.24
CMTM4-202ENST00000394106 RBCK1Q9BYM8 510 aa29.06■■■□□ 2.24
CMTM4-202ENST00000394106 ZBTB20Q9HC78 741 aaPredicted RBP29.06■■■□□ 2.24
CMTM4-202ENST00000394106 GPRC5BQ9NZH0 403 aa29.06■■■□□ 2.24
CMTM4-202ENST00000394106 NUDT4Q9NZJ9 180 aa29.06■■■□□ 2.24
CMTM4-202ENST00000394106 PLAAQ9Y263 795 aa29.06■■■□□ 2.24
CMTM4-202ENST00000394106 DOCK10Q96BY6 2186 aa29.06■■■□□ 2.24
CMTM4-202ENST00000394106 TENM4Q6N022 2769 aa29.05■■■□□ 2.24
CMTM4-202ENST00000394106 IGHV1-45A0A0A0MS14 117 aa29.05■■■□□ 2.24
CMTM4-202ENST00000394106 CLGNO14967 610 aa29.05■■■□□ 2.24
CMTM4-202ENST00000394106 GALR3O60755 368 aaPredicted RBP29.05■■■□□ 2.24
CMTM4-202ENST00000394106 C2P06681 752 aa29.05■■■□□ 2.24
CMTM4-202ENST00000394106 C8orf89P0DMQ9 161 aa29.05■■■□□ 2.24
CMTM4-202ENST00000394106 FOXK1P85037 733 aa29.05■■■□□ 2.24
CMTM4-202ENST00000394106 PDK4Q16654 411 aa29.05■■■□□ 2.24
CMTM4-202ENST00000394106 AGAP7PQ5VUJ5 663 aa29.05■■■□□ 2.24
CMTM4-202ENST00000394106 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP29.05■■■□□ 2.24
CMTM4-202ENST00000394106 TM9SF4Q92544 642 aa29.05■■■□□ 2.24
CMTM4-202ENST00000394106 PEX11GQ96HA9 241 aa29.05■■■□□ 2.24
CMTM4-202ENST00000394106 AGAP4Q96P64 663 aa29.05■■■□□ 2.24
CMTM4-202ENST00000394106 SLC6A16Q9GZN6 736 aa29.05■■■□□ 2.24
CMTM4-202ENST00000394106 SLAMF7Q9NQ25 335 aa29.05■■■□□ 2.24
CMTM4-202ENST00000394106 OR2W5A6NFC9 320 aa29.04■■■□□ 2.24
CMTM4-202ENST00000394106 UBXN8O00124 270 aa29.04■■■□□ 2.24
CMTM4-202ENST00000394106 PCDH17O14917 1159 aa29.04■■■□□ 2.24
CMTM4-202ENST00000394106 KERAO60938 352 aa29.04■■■□□ 2.24
CMTM4-202ENST00000394106 SERPINB8P50452 374 aa29.04■■■□□ 2.24
CMTM4-202ENST00000394106 RAB8AP61006 207 aa29.04■■■□□ 2.24
CMTM4-202ENST00000394106 SKP1P63208 163 aa29.04■■■□□ 2.24
CMTM4-202ENST00000394106 OLR1P78380 273 aa29.04■■■□□ 2.24
CMTM4-202ENST00000394106 TOR1AIP1Q5JTV8 583 aa29.04■■■□□ 2.24
CMTM4-202ENST00000394106 TMEM205Q6UW68 189 aa29.04■■■□□ 2.24
CMTM4-202ENST00000394106 TMIGD1Q6UXZ0 262 aa29.04■■■□□ 2.24
CMTM4-202ENST00000394106 KBTBD2Q8IY47 623 aa29.04■■■□□ 2.24
CMTM4-202ENST00000394106 CENPLQ8N0S6 344 aaPredicted RBP29.04■■■□□ 2.24
CMTM4-202ENST00000394106 KRT78Q8N1N4 520 aa29.04■■■□□ 2.24
CMTM4-202ENST00000394106 ZADH2Q8N4Q0 377 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms