RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 CRLF3Q8IUI8 442 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 CNTN4Q8IWV2 1026 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 PPIL6Q8IXY8 311 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 MYO1HQ8N1T3 1032 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 HIST1H2AHQ96KK5 128 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 SIGLEC12Q96PQ1 595 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 NPAS2Q99743 824 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 HIST1H2AJQ99878 128 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 NAT9Q9BTE0 207 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 H2AFJQ9BTM1 129 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 SH2B3Q9UQQ2 575 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 NAALAD2Q9Y3Q0 740 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 JRKLQ9Y4A0 524 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 FEZF1A0PJY2 475 aa16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 GALR3O60755 368 aaPredicted RBP16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 RDH16O75452 317 aa16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 PGAM1P18669 254 aa16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 JAK1P23458 1154 aa16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 CCR8P51685 355 aa16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 SMSP52788 366 aa16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 TAS2R50P59544 299 aa16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 DHX9Q08211 1270 aaKnown RBP16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 USP10Q14694 798 aaKnown RBP16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 KCTD19Q17RG1 926 aaPredicted RBP16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 SFT2D3Q587I9 215 aa16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 DUPD1Q68J44 220 aa16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 LRRC8AQ8IWT6 810 aa16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 AMER2Q8N7J2 671 aa16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 OR56A3Q8NH54 315 aa16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 ELP5Q8TE02 316 aa16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 TBC1D20Q96BZ9 403 aa16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 FRMD6Q96NE9 622 aa16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 MACROD1Q9BQ69 325 aa16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 ATG10Q9H0Y0 220 aa16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 TRIM45Q9H8W5 580 aaPredicted RBP16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 NCOA6Q14686 2063 aaPredicted RBP16.45■□□□□ 0.22
SNRPA1-202ENST00000394082 TRBC2A0A5B9 178 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 NEURL1O76050 574 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 STATHP02808 62 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 FHP07954 510 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 F7P08709 466 aaPredicted RBP16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 CDH1P12830 882 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 FNTAP49354 379 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 SLC26A5P58743 744 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 PMP22Q01453 160 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 ALDH6A1Q02252 535 aaKnown RBP16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 ACTN3Q08043 901 aaPredicted RBP16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 CRYMQ14894 314 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 FCRLBQ6BAA4 426 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 PAQR3Q6TCH7 311 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 SPPL2CQ8IUH8 684 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 SHISA5Q8N114 240 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 ARMC10Q8N2F6 343 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 TBC1D19Q8N5T2 526 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 FAM98AQ8NCA5 519 aaKnown RBP16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 ZNF740Q8NDX6 193 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 ZCCHC10Q8TBK6 192 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 ADAMTS18Q8TE60 1221 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 GRK7Q8WTQ7 553 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 ATL1Q8WXF7 558 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 SNF8Q96H20 258 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 PEX11GQ96HA9 241 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 MAGED4Q96JG8 741 aa16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 IARS2Q9NSE4 1012 aaKnown RBP16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 CORO1CQ9ULV4 474 aaPredicted RBP16.44■□□□□ 0.22
SNRPA1-202ENST00000394082 OR2W5A6NFC9 320 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 GABRR3A8MPY1 467 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 TSPAN12O95859 305 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 SP1P08047 785 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 ENO2P09104 434 aaPredicted RBP16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 ESRRAP11474 423 aaPredicted RBP16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 ALOX12P18054 663 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 GABRB3P28472 473 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 AHRP35869 848 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 IL2P60568 153 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 ADORA2A-AS1P86434 159 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 C3AR1Q16581 482 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 PHKG1Q16816 387 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 ZXDCQ2QGD7 858 aaPredicted RBP16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 SPANXN3Q5MJ09 141 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 RNASEH2BQ5TBB1 312 aaKnown RBP16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 SPINK14Q6IE38 97 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 SLC25A25Q6KCM7 469 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 MBOAT1Q6ZNC8 495 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 QSOX2Q6ZRP7 698 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 SPNS2Q8IVW8 549 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 SIAH3Q8IW03 269 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 NT5CQ8TCD5 201 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 PDLIM5Q96HC4 596 aaKnown RBP16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 NDNQ99608 321 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 OLFM1Q99784 485 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 TRIM54Q9BYV2 358 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 ZFP69BQ9UJL9 534 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 SCN3AQ9NY46 2000 aa16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 TEP1Q99973 2627 aaKnown RBP16.43■□□□□ 0.22
SNRPA1-202ENST00000394082 PGRMC1O00264 195 aaKnown RBP16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 NDUFS4O43181 175 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 ASNA1O43681 348 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 WISP2O76076 250 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 AHSGP02765 367 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms