RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 HIST2H2AA3Q6FI13 130 aa14.34□□□□□ -0.11
MKS1-202ENST00000393119 DTWD1Q8N5C7 304 aa14.34□□□□□ -0.11
MKS1-202ENST00000393119 CIDECQ96AQ7 238 aaPredicted RBP14.34□□□□□ -0.11
MKS1-202ENST00000393119 ORAI3Q9BRQ5 295 aa14.34□□□□□ -0.11
MKS1-202ENST00000393119 KLHL31Q9H511 634 aa14.34□□□□□ -0.11
MKS1-202ENST00000393119 RMI1Q9H9A7 625 aa14.34□□□□□ -0.11
MKS1-202ENST00000393119 BRF2Q9HAW0 419 aa14.34□□□□□ -0.11
MKS1-202ENST00000393119 RIMS3Q9UJD0 308 aa14.34□□□□□ -0.11
MKS1-202ENST00000393119 RUVBL1Q9Y265 456 aaKnown RBP14.34□□□□□ -0.11
MKS1-202ENST00000393119 PRSS51A0A1B0GVH4 220 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 TCRBV3S1A0A5B6 114 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 BTN3A3O00478 584 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 RPN2P04844 631 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 TFAP2AP05549 437 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 DCNP07585 359 aaKnown RBP14.33□□□□□ -0.11
MKS1-202ENST00000393119 ABCB1P08183 1280 aaPredicted RBP14.33□□□□□ -0.11
MKS1-202ENST00000393119 HTR1BP28222 390 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 PKLRP30613 574 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 CCR3P51677 355 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 RHDQ02161 417 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 MAP7Q14244 749 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 PAGE2BQ5JRK9 111 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 KIAA1614Q5VZ46 1190 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 KIAA0895LQ68EN5 471 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 HMBOX1Q6NT76 420 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 ISLR2Q6UXK2 745 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 GPR180Q86V85 440 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 FAM86B1Q8N7N1 296 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 KLHL4Q9C0H6 718 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 LTB4R2Q9NPC1 389 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 SH3BP4Q9P0V3 963 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 UTS2RQ9UKP6 389 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 TMED5Q9Y3A6 229 aa14.33□□□□□ -0.11
MKS1-202ENST00000393119 C4orf51C9J302 202 aa14.33□□□□□ -0.12
MKS1-202ENST00000393119 NPIPB8E9PQR5 432 aa14.33□□□□□ -0.12
MKS1-202ENST00000393119 PLPP1O14494 284 aa14.33□□□□□ -0.12
MKS1-202ENST00000393119 TIA1P31483 386 aaKnown RBP eCLIP14.33□□□□□ -0.12
MKS1-202ENST00000393119 KIR3DL1P43629 444 aa14.33□□□□□ -0.12
MKS1-202ENST00000393119 TAS2R50P59544 299 aa14.33□□□□□ -0.12
MKS1-202ENST00000393119 EIF2B5Q13144 721 aaKnown RBP14.33□□□□□ -0.12
MKS1-202ENST00000393119 PDK3Q15120 406 aa14.33□□□□□ -0.12
MKS1-202ENST00000393119 MPEG1Q2M385 716 aa14.33□□□□□ -0.12
MKS1-202ENST00000393119 RUNDC3AQ59EK9 446 aa14.33□□□□□ -0.12
MKS1-202ENST00000393119 PRMT9Q6P2P2 845 aa14.33□□□□□ -0.12
MKS1-202ENST00000393119 GALNT10Q86SR1 603 aa14.33□□□□□ -0.12
MKS1-202ENST00000393119 MARVELD2Q8N4S9 558 aa14.33□□□□□ -0.12
MKS1-202ENST00000393119 GLB1L3Q8NCI6 653 aaPredicted RBP14.33□□□□□ -0.12
MKS1-202ENST00000393119 ASB12Q8WXK4 309 aa14.33□□□□□ -0.12
MKS1-202ENST00000393119 MPP4Q96JB8 637 aa14.33□□□□□ -0.12
MKS1-202ENST00000393119 LRGUKQ96M69 825 aa14.33□□□□□ -0.12
MKS1-202ENST00000393119 HAUS8Q9BT25 410 aa14.33□□□□□ -0.12
MKS1-202ENST00000393119 EHD1Q9H4M9 534 aa14.33□□□□□ -0.12
MKS1-202ENST00000393119 LHX9Q9NQ69 397 aa14.33□□□□□ -0.12
MKS1-202ENST00000393119 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.33□□□□□ -0.12
MKS1-202ENST00000393119 AP4S1Q9Y587 144 aa14.33□□□□□ -0.12
MKS1-202ENST00000393119 TRBV5-3A0A0A0MS03 114 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 IGHV1OR15-9A0A0B4J2B8 117 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 C10orf142B7Z368 130 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 MAN2B1O00754 1011 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 HAT1O14929 419 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 APBB3O95704 486 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 C8BP07358 591 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 THEGLP0DJG4 465 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 C7P10643 843 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 CD6P30203 668 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 PLA2G16P53816 162 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 EMP3P54852 163 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 PRDX1Q06830 199 aaKnown RBP14.32□□□□□ -0.12
MKS1-202ENST00000393119 FOXM1Q08050 763 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 CYP4F3Q08477 520 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 TRAP1Q12931 704 aaKnown RBP14.32□□□□□ -0.12
MKS1-202ENST00000393119 ARHGAP19Q14CB8 494 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 GRAMD1BQ3KR37 738 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 ADGRF3Q8IZF5 1079 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 TMEM102Q8N9M5 508 aaPredicted RBP14.32□□□□□ -0.12
MKS1-202ENST00000393119 SEPHS2Q99611 448 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 ZNF717Q9BY31 904 aaPredicted RBP14.32□□□□□ -0.12
MKS1-202ENST00000393119 AASDHPPTQ9NRN7 309 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 SNX13Q9Y5W8 968 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 DGKBQ9Y6T7 804 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 TTC36A6NLP5 189 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 ISM1B1AKI9 464 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 FOXE1O00358 373 aaPredicted RBP14.32□□□□□ -0.12
MKS1-202ENST00000393119 RFXANKO14593 260 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 DENRO43583 198 aaKnown RBP14.32□□□□□ -0.12
MKS1-202ENST00000393119 PRICKLE3O43900 615 aaPredicted RBP14.32□□□□□ -0.12
MKS1-202ENST00000393119 PRKRAO75569 313 aaKnown RBP14.32□□□□□ -0.12
MKS1-202ENST00000393119 WNT1P04628 370 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 HOXB9P17482 250 aaPredicted RBP14.32□□□□□ -0.12
MKS1-202ENST00000393119 MAPK1P28482 360 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 TPP2P29144 1249 aaPredicted RBP14.32□□□□□ -0.12
MKS1-202ENST00000393119 PTGER1P34995 402 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 BCL6P41182 706 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 RGS19P49795 217 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 CCR8P51685 355 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 FZD2Q14332 565 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 GLYATQ6IB77 296 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 ZNF621Q6ZSS3 439 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 ABI3BPQ7Z7G0 1075 aa14.32□□□□□ -0.12
MKS1-202ENST00000393119 ABCA7Q8IZY2 2146 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms