RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 TMEM175Q9BSA9 504 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 TRIM62Q9BVG3 475 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 SMOC2Q9H3U7 446 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 GAREM1Q9H706 876 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 KIF25Q9UIL4 384 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 CSNK1G3Q9Y6M4 447 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 SCAMP3O14828 347 aaKnown RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 PIP5K1BO14986 540 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 TCAPO15273 167 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 PSMD3O43242 534 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 HBP1O60381 514 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 GOT2P00505 430 aaKnown RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 VTNP04004 478 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF286BP0CG31 522 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 ACADMP11310 421 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 YBX3P16989 372 aaKnown RBP eCLIP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 GJA1P17302 382 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 ISL1P61371 349 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 MLLT1Q03111 559 aaPredicted RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 CTBP1Q13363 440 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 SF3A2Q15428 464 aaKnown RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 NTRK2Q16620 822 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 PFKFB4Q16877 469 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 HKDC1Q2TB90 917 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF648Q5T619 568 aaPredicted RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 IER5Q5VY09 327 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 CYB5R2Q6BCY4 276 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 GPR139Q6DWJ6 353 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 DPY19L2P1Q6NXN4 242 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 USP30Q70CQ3 517 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF367Q7RTV3 350 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 DCUN1D3Q8IWE4 304 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 PTGR2Q8N8N7 351 aaPredicted RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 MYO19Q96H55 970 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 ALOXE3Q9BYJ1 711 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 RNF167Q9H6Y7 350 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 LTB4R2Q9NPC1 389 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 SEMA4BQ9NPR2 832 aaPredicted RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 UBP1Q9NZI7 540 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 GTF2IRD1Q9UHL9 959 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 RPS6KA6Q9UK32 745 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 SAMD4AQ9UPU9 718 aaKnown RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 CRYL1Q9Y2S2 319 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 BCLAF3A2AJT9 711 aaKnown RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 OR6C75A6NL08 312 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 H3BN98 237 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 USP2O75604 605 aaPredicted RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 CAPNS1P04632 268 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 ALPPP05187 535 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 SFTPCP11686 197 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 DCTP40126 519 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 RGS19P49795 217 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 NR0B1P51843 470 aaKnown RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 CDH8P55286 799 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 SNRPEP62304 92 aaKnown RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 RPP30P78346 268 aaKnown RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 TOMM5Q8N4H5 51 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF655Q8N720 491 aaPredicted RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 TMEM185AQ8NFB2 350 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 CLEC4DQ8WXI8 215 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 KCNC2Q96PR1 638 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 SLC38A3Q99624 504 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 PKMYT1Q99640 499 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 NIF3L1Q9GZT8 377 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 SLC28A3Q9HAS3 691 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 GSN-AS1Q9NRJ2 163 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 ENAMQ9NRM1 1142 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 COMMD9Q9P000 198 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 PIN4Q9Y237 131 aaKnown RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 BTAF1O14981 1849 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 A0A075B6Q4 140 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 BRINP1O60477 761 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 NIPSNAP2O75323 286 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 SLC2A4P14672 509 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 HPGDP15428 266 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 CD1EP15812 388 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 VAMP1P23763 118 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 KIR2DL3P43628 341 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 PPP3R1P63098 170 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 SLC35A2P78381 396 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF460Q14592 562 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 LARS2Q15031 903 aaKnown RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 PROX2Q3B8N5 592 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 PAN2Q504Q3 1202 aaKnown RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 SGO1Q5FBB7 561 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 SH3PXD2AQ5TCZ1 1133 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 SLC46A3Q7Z3Q1 461 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 SPATA19Q7Z5L4 167 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 BOLLQ8N9W6 283 aaKnown RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 IPMKQ8NFU5 416 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 OR8D4Q8NGM9 314 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 OR10Q1Q8NGQ4 319 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 SNX33Q8WV41 574 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 LENG9Q96B70 501 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 TMEM209Q96SK2 561 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 WDR83Q9BRX9 315 aaKnown RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 PTDSS2Q9BVG9 487 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 SPATA5L1Q9BVQ7 753 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 SLC29A3Q9BZD2 475 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 EMC7Q9NPA0 242 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms