RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 H0YIV9 168 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 RRP9O43818 475 aaKnown RBP6.44□□□□□ -1.38
UBBP1-201ENST00000392399 TYROBPO43914 113 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 NRP2O60462 931 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 SUPT7LO94864 414 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 SIX3O95343 332 aaPredicted RBP6.44□□□□□ -1.38
UBBP1-201ENST00000392399 OTCP00480 354 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 CTSBP07858 339 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 VARSP26640 1264 aaKnown RBP6.44□□□□□ -1.38
UBBP1-201ENST00000392399 PIK3CBP42338 1070 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 AVPR1BP47901 424 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 CCNG1P51959 295 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 ARFIP1P53367 373 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 STXBP1P61764 594 aaKnown RBP6.44□□□□□ -1.38
UBBP1-201ENST00000392399 MC1RQ01726 317 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 TLE3Q04726 772 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 CLCQ05315 142 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 ZNF33BQ06732 778 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 SLBPQ14493 270 aaKnown RBP eCLIP6.44□□□□□ -1.38
UBBP1-201ENST00000392399 HERC3Q15034 1050 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 TGIF1Q15583 401 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 HKDC1Q2TB90 917 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 NKAIN1Q4KMZ8 207 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 FBXO48Q5FWF7 155 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 PRAMEF17Q5VTA0 474 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 ZNF385CQ66K41 422 aaPredicted RBP6.44□□□□□ -1.38
UBBP1-201ENST00000392399 GRHL2Q6ISB3 625 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 TMEM214Q6NUQ4 689 aaKnown RBP6.44□□□□□ -1.38
UBBP1-201ENST00000392399 MED27Q6P2C8 311 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 CHSY3Q70JA7 882 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 ABHD13Q7L211 337 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 OVCH1Q7RTY7 1134 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 GOLGA7Q7Z5G4 137 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 MILR1Q7Z6M3 343 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 EXOC3L1Q86VI1 746 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 SPACA3Q8IXA5 215 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 LAS2Q8IYD9 372 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 ARHGEF39Q8N4T4 335 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 ANKRD53Q8N9V6 530 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 CCDC63Q8NA47 563 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 ZSCAN1Q8NBB4 408 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 ZNF740Q8NDX6 193 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 SRFBP1Q8NEF9 429 aaKnown RBP6.44□□□□□ -1.38
UBBP1-201ENST00000392399 TCP10LQ8TDR4 215 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 ZNF483Q8TF39 744 aaPredicted RBP6.44□□□□□ -1.38
UBBP1-201ENST00000392399 MR1Q95460 341 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 FKBP10Q96AY3 582 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 NACC2Q96BF6 587 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 SLC45A3Q96JT2 553 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 SH3GL2Q99962 352 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 TRMOQ9BU70 441 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 DRC3Q9H069 523 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 SLC26A1Q9H2B4 701 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 CENPHQ9H3R5 247 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 NOL11Q9H8H0 719 aaKnown RBP6.44□□□□□ -1.38
UBBP1-201ENST00000392399 ACTR8Q9H981 624 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 GPN2Q9H9Y4 310 aaPredicted RBP6.44□□□□□ -1.38
UBBP1-201ENST00000392399 ZBTB26Q9HCK0 441 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 ZNF304Q9HCX3 659 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 STARD5Q9NSY2 213 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 OXSMQ9NWU1 459 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 IFT80Q9P2H3 777 aaPredicted RBP6.44□□□□□ -1.38
UBBP1-201ENST00000392399 DHCR7Q9UBM7 475 aaKnown RBP6.44□□□□□ -1.38
UBBP1-201ENST00000392399 NDOR1Q9UHB4 597 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 GPN3Q9UHW5 284 aaPredicted RBP6.44□□□□□ -1.38
UBBP1-201ENST00000392399 EMCNQ9ULC0 261 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 ZNF490Q9ULM2 529 aaPredicted RBP6.44□□□□□ -1.38
UBBP1-201ENST00000392399 PPT2Q9UMR5 302 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 RUVBL1Q9Y265 456 aaKnown RBP6.44□□□□□ -1.38
UBBP1-201ENST00000392399 FARSAQ9Y285 508 aaKnown RBP6.44□□□□□ -1.38
UBBP1-201ENST00000392399 ASB1Q9Y576 335 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 SDK2Q58EX2 2172 aa6.44□□□□□ -1.38
UBBP1-201ENST00000392399 USP24Q9UPU5 2620 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 A0A088AWK7 358 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 LOC101059948A0A1B0GTJ6 334 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 TEX51A0A1B0GUA7 166 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 LRIT2A6NDA9 550 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 LRRC14BA6NHZ5 514 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 SRRM3A6NNA2 597 aaPredicted RBP6.43□□□□□ -1.38
UBBP1-201ENST00000392399 FOXO6A8MYZ6 492 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 FOXE1O00358 373 aaPredicted RBP6.43□□□□□ -1.38
UBBP1-201ENST00000392399 OR7A17O14581 309 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 TERTO14746 1132 aaKnown RBP6.43□□□□□ -1.38
UBBP1-201ENST00000392399 TM9SF1O15321 606 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 NDUFS4O43181 175 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 PRAMEF4O60810 478 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 TRIM13O60858 407 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 ZWINTO95229 277 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 NSA2O95478 260 aaKnown RBP6.43□□□□□ -1.38
UBBP1-201ENST00000392399 SERPIND1P05546 499 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 SMIM10L1P0DMW3 83 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 ALOX12P18054 663 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 CD22P20273 847 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 ITGAXP20702 1163 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 ZNF10P21506 573 aaPredicted RBP6.43□□□□□ -1.38
UBBP1-201ENST00000392399 IL10P22301 178 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 PTX3P26022 381 aaPredicted RBP6.43□□□□□ -1.38
UBBP1-201ENST00000392399 PTPN4P29074 926 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 DLSTP36957 453 aa6.43□□□□□ -1.38
UBBP1-201ENST00000392399 TSFMP43897 325 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms