RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 CCT8L1PA6NM43 557 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 PRSS46E5RG02 174 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 SAP18O00422 153 aaKnown RBP0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 LRRTM2O43300 516 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 SNAI2O43623 268 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 TOMM70O94826 608 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 IRF2P14316 349 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 PRKAR2BP31323 418 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 FCGR2BP31994 310 aaPredicted RBP0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 FCGR2CP31995 323 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 BRCC3P46736 316 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 SLC25A1P53007 311 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 BTG1P62324 171 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 VEZF1Q14119 521 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 CRMP1Q14194 572 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 SF3A2Q15428 464 aaKnown RBP0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 TEX35Q5T0J7 233 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 KPRPQ5T749 579 aaPredicted RBP0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 AGAP6Q5VW22 663 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 KRTAP5-10Q6L8G5 202 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 ZSCAN25Q6NSZ9 544 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 ADAMTSL2Q86TH1 951 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 TGIF2LYQ8IUE0 185 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 ESX1Q8N693 406 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 ROBO4Q8WZ75 1007 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 ZBED6CLQ96FA7 236 aaPredicted RBP0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 CCT8L2Q96SF2 557 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 ZNF670Q9BS34 389 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 PDCL3Q9H2J4 239 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 SH2D4AQ9H788 454 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 THYN1Q9P016 225 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 PLAGL1Q9UM63 463 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 CFAP65Q6ZU64 1925 aaKnown RBP0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 TNRQ92752 1358 aa0.56□□□□□ -2.32
RNU6-239P-201ENST00000390990 KIF26AQ9ULI4 1882 aaPredicted RBP0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 NEMP2A6NFY4 417 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 IGLON5A6NGN9 336 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 RRN3P2A6NIE6 340 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 LRRC72A6NJI9 287 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 FOXI3A8MTJ6 420 aaPredicted RBP0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 A8MU76 341 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 ZNF487B1APH4 448 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 TRIM49D1C9J1S8 452 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 ANKRD63C9JTQ0 380 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 EEF2KO00418 725 aaKnown RBP0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 ZNF823P16415 610 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 HMGCLP35914 325 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 FNTAP49354 379 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 NDST1P52848 882 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 CRYBA2P53672 197 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 MAPK12P53778 367 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 EIF5P55010 431 aaKnown RBP0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 PFN3P60673 137 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 PAX2Q02962 417 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 SGCBQ16585 318 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 FGD3Q5JSP0 725 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 SPANXN4Q5MJ08 99 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 CYB5D1Q6P9G0 228 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 IGFL1Q6UW32 110 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 SYVN1Q86TM6 617 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 GBP7Q8N8V2 638 aaPredicted RBP0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 CASP10Q92851 521 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 SPDL1Q96EA4 605 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 C16orf74Q96GX8 76 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 VSIG2Q96IQ7 327 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 SFXN2Q96NB2 322 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 BTBD9Q96Q07 612 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 TNFRSF13CQ96RJ3 184 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 SERINC2Q96SA4 455 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 CDX2Q99626 313 aaPredicted RBP0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 HSD17B14Q9BPX1 270 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 PAPOLGQ9BWT3 736 aaKnown RBP0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 HRH4Q9H3N8 390 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 NECAP2Q9NVZ3 263 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 DPP3Q9NY33 737 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 CORO1CQ9ULV4 474 aaPredicted RBP0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 MGAT4AQ9UM21 535 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 ZNF148Q9UQR1 794 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 NPHP3Q7Z494 1330 aa0.55□□□□□ -2.32
RNU6-239P-201ENST00000390990 IGHV3-35A0A0C4DH35 117 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 LOC390937A0A1W2PQ73 354 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 CASTOR2A6NHX0 329 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 SIGLEC5O15389 551 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 EMC8O43402 210 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 RB1P06400 928 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 XBP1P17861 261 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 CCR9P51686 369 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 CASP6P55212 293 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 CDH8P55286 799 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 PRAMEP78395 509 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 PRKCEQ02156 737 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 GCKRQ14397 625 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 ABRAXAS2Q15018 415 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 LY6EQ16553 131 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 C17orf58Q2M2W7 97 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 CPEB2Q7Z5Q1 589 aaKnown RBP0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 CPLX4Q7Z7G2 160 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 DND1Q8IYX4 353 aaKnown RBP0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 SLC22A18ASQ8N1D0 253 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 PDILTQ8N807 584 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms