RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 SNX6Q9UNH7 406 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.91■□□□□ 0.46
SMN2-202ENST00000380742 RAP2CQ9Y3L5 183 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 B3GALT1Q9Y5Z6 326 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 MAGEB17A8MXT2 336 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 C9orf172C9J069 976 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 ZSCAN9O15535 394 aaPredicted RBP17.91■□□□□ 0.46
SMN2-202ENST00000380742 CRCPO75575 148 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 SNUPNO95149 360 aaKnown RBP17.91■□□□□ 0.46
SMN2-202ENST00000380742 TNFSF15O95150 251 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 KRT6AP02538 564 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 KRT6BP04259 564 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 SERPINA6P08185 405 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 SLC35G6P0C7Q6 338 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 SERPINB1P30740 379 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 KRT6CP48668 564 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 RAB15P59190 212 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 RPS13P62277 151 aaKnown RBP17.91■□□□□ 0.46
SMN2-202ENST00000380742 GRM7Q14831 915 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 ABRAXAS2Q15018 415 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.91■□□□□ 0.46
SMN2-202ENST00000380742 DCAF12Q5T6F0 453 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 TLDC1Q6P9B6 456 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 CEACAM20Q6UY09 585 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 CLYBLQ8N0X4 340 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 SELENOMQ8WWX9 145 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 CCT6BQ92526 530 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 HBEGFQ99075 208 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 DDA1Q9BW61 102 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 MS4A8Q9BY19 250 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 SLC6A16Q9GZN6 736 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 KLHL31Q9H511 634 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 PNPOQ9NVS9 261 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 MRPS2Q9Y399 296 aaKnown RBP17.91■□□□□ 0.46
SMN2-202ENST00000380742 SDK2Q58EX2 2172 aa17.91■□□□□ 0.46
SMN2-202ENST00000380742 HYKKA2RU49 373 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 LRIT2A6NDA9 550 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 FOXE1O00358 373 aaPredicted RBP17.9■□□□□ 0.46
SMN2-202ENST00000380742 TXNDC9O14530 226 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 ZNF749O43361 778 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 SH3BGRLO75368 114 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 ULK1O75385 1050 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 SCRG1O75711 98 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 TGFB1P01137 390 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 ZNF28P17035 718 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 HNRNPH1P31943 449 aaKnown RBP17.9■□□□□ 0.46
SMN2-202ENST00000380742 MDH1P40925 334 aaKnown RBP17.9■□□□□ 0.46
SMN2-202ENST00000380742 RGS1Q08116 209 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 TOR1AIP1Q5JTV8 583 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 MANEAQ5SRI9 462 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 SCIMPQ6UWF3 145 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 RGS9BPQ6ZS82 235 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 TMEM126BQ8IUX1 230 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 C10orf90Q96M02 699 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 SLC46A1Q96NT5 459 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 NLNQ9BYT8 704 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 NRSN2Q9GZP1 204 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 TUBB1Q9H4B7 451 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 SLCO1B3Q9NPD5 702 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 PCDHGA3Q9Y5H0 932 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 DNAJC15Q9Y5T4 150 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 SPTBN2O15020 2390 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 AKAP13Q12802 2813 aa17.9■□□□□ 0.46
SMN2-202ENST00000380742 C4orf51C9J302 202 aa17.89■□□□□ 0.45
SMN2-202ENST00000380742 ETHE1O95571 254 aa17.89■□□□□ 0.45
SMN2-202ENST00000380742 ADRB1P08588 477 aa17.89■□□□□ 0.45
SMN2-202ENST00000380742 RPL14P50914 215 aaKnown RBP17.89■□□□□ 0.45
SMN2-202ENST00000380742 GYS2P54840 703 aa17.89■□□□□ 0.45
SMN2-202ENST00000380742 ADPRMQ3LIE5 342 aa17.89■□□□□ 0.45
SMN2-202ENST00000380742 C10orf62Q5T681 223 aaPredicted RBP17.89■□□□□ 0.45
SMN2-202ENST00000380742 TMEM214Q6NUQ4 689 aaKnown RBP17.89■□□□□ 0.45
SMN2-202ENST00000380742 DTWD1Q8N5C7 304 aa17.89■□□□□ 0.45
SMN2-202ENST00000380742 TTC29Q8NA56 475 aaPredicted RBP17.89■□□□□ 0.45
SMN2-202ENST00000380742 SLC38A9Q8NBW4 561 aa17.89■□□□□ 0.45
SMN2-202ENST00000380742 CMTM7Q96FZ5 175 aa17.89■□□□□ 0.45
SMN2-202ENST00000380742 F2RL3Q96RI0 385 aa17.89■□□□□ 0.45
SMN2-202ENST00000380742 ASPSCR1Q9BZE9 553 aa17.89■□□□□ 0.45
SMN2-202ENST00000380742 OR51B5Q9H339 312 aa17.89■□□□□ 0.45
SMN2-202ENST00000380742 PSD3Q9NYI0 1048 aa17.89■□□□□ 0.45
SMN2-202ENST00000380742 PPT2Q9UMR5 302 aa17.89■□□□□ 0.45
SMN2-202ENST00000380742 PCDHB3Q9Y5E6 796 aa17.89■□□□□ 0.45
SMN2-202ENST00000380742 TRABD2BA6NFA1 517 aa17.88■□□□□ 0.45
SMN2-202ENST00000380742 NTRK1P04629 796 aa17.88■□□□□ 0.45
SMN2-202ENST00000380742 SMIM10L1P0DMW3 83 aa17.88■□□□□ 0.45
SMN2-202ENST00000380742 EMP3P54852 163 aa17.88■□□□□ 0.45
SMN2-202ENST00000380742 PHEXP78562 749 aa17.88■□□□□ 0.45
SMN2-202ENST00000380742 RTP5Q14D33 572 aa17.88■□□□□ 0.45
SMN2-202ENST00000380742 FAM214AQ32MH5 1076 aa17.88■□□□□ 0.45
SMN2-202ENST00000380742 ZCCHC10Q8TBK6 192 aa17.88■□□□□ 0.45
SMN2-202ENST00000380742 UTP15Q8TED0 518 aaKnown RBP17.88■□□□□ 0.45
SMN2-202ENST00000380742 TWIST2Q8WVJ9 160 aa17.88■□□□□ 0.45
SMN2-202ENST00000380742 MS4A6EQ96DS6 147 aa17.88■□□□□ 0.45
SMN2-202ENST00000380742 SMIM10Q96HG1 83 aa17.88■□□□□ 0.45
SMN2-202ENST00000380742 C7orf26Q96N11 449 aa17.88■□□□□ 0.45
SMN2-202ENST00000380742 TEFMQ96QE5 360 aaKnown RBP17.88■□□□□ 0.45
SMN2-202ENST00000380742 ZPBPQ9BS86 351 aa17.88■□□□□ 0.45
SMN2-202ENST00000380742 NDC1Q9BTX1 674 aa17.88■□□□□ 0.45
SMN2-202ENST00000380742 ACTR5Q9H9F9 607 aaPredicted RBP17.88■□□□□ 0.45
SMN2-202ENST00000380742 BRF2Q9HAW0 419 aa17.88■□□□□ 0.45
SMN2-202ENST00000380742 PRM3Q9NNZ6 103 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms