RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 DTD2Q96FN9 168 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 OR4K3Q96R72 315 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 HOPXQ9BPY8 73 aaPredicted RBP10.42□□□□□ -0.74
NEDD9-201ENST00000379433 FAM83CQ9BQN1 747 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 CRNNQ9UBG3 495 aaPredicted RBP10.42□□□□□ -0.74
NEDD9-201ENST00000379433 SUCOQ9UBS9 1254 aaKnown RBP10.42□□□□□ -0.74
NEDD9-201ENST00000379433 CD300AQ9UGN4 299 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 MSRAQ9UJ68 235 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 C15orf38-AP3S2A0A0A6YYH1 394 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 PDZK1P1A8MUH7 402 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 SOCS2O14508 198 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 RB1P06400 928 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 COX7A2P14406 83 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 ALOX12P18054 663 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 OPRD1P41143 372 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 ST13P50502 369 aaKnown RBP10.42□□□□□ -0.74
NEDD9-201ENST00000379433 TBPL1P62380 186 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 KRT80Q6KB66 452 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 DPPA4Q7L190 304 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 TECPR1Q7Z6L1 1165 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 SLC51BQ86UW2 128 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 ETFBKMTQ8IXQ9 262 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 HS3ST5Q8IZT8 346 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 OR4K1Q8NGD4 311 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 GBP5Q96PP8 586 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 MKRN2Q9H000 416 aaKnown RBP10.42□□□□□ -0.74
NEDD9-201ENST00000379433 IFT22Q9H7X7 185 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 SLC35C2Q9NQQ7 365 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 SPASTQ9UBP0 616 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 GULP1Q9UBP9 304 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 KLHL20Q9Y2M5 609 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 STON1Q9Y6Q2 735 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 MTCL1Q9Y4B5 1905 aaKnown RBP10.42□□□□□ -0.74
NEDD9-201ENST00000379433 FEZF1A0PJY2 475 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 FAM47E-STBD1D6RA91 191 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 SPINT1O43278 529 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 ICMTO60725 284 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 DNTTP04053 509 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 IMPA1P29218 277 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 HOXA9P31269 272 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 ZFP36L2P47974 494 aaKnown RBP10.41□□□□□ -0.74
NEDD9-201ENST00000379433 DIO1P49895 249 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 CLCNKAP51800 687 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 RPS13P62277 151 aaKnown RBP10.41□□□□□ -0.74
NEDD9-201ENST00000379433 PLCL1Q15111 1095 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 CCDC85BQ15834 202 aaPredicted RBP10.41□□□□□ -0.74
NEDD9-201ENST00000379433 CES5AQ6NT32 575 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 ARPINQ7Z6K5 226 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 LSRQ86X29 649 aaPredicted RBP10.41□□□□□ -0.74
NEDD9-201ENST00000379433 ZNF480Q8WV37 535 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 NMD3Q96D46 503 aaKnown RBP10.41□□□□□ -0.74
NEDD9-201ENST00000379433 PPP1R16AQ96I34 528 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 NSMCE2Q96MF7 247 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 PANX1Q96RD7 426 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 TMEM121BQ9BXQ6 578 aaPredicted RBP10.41□□□□□ -0.74
NEDD9-201ENST00000379433 RAD21L1Q9H4I0 556 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 C5AR2Q9P296 337 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 PCOLCE2Q9UKZ9 415 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 SCN2AQ99250 2005 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 DOCK8Q8NF50 2099 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 C7orf72A4D263 438 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 ANKRD34BA5PLL1 514 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 OR52A4PA6NMU1 304 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 AGAP14A8MT82 685 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 BBIP1A8MTZ0 92 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 GNAO1P09471 354 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 ALDH9A1P49189 494 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 PHC1P78364 1004 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 DUSP6Q16828 381 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 CYP27C1Q4G0S4 372 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 SNAP47Q5SQN1 464 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 LDLRAP1Q5SW96 308 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 FCRLBQ6BAA4 426 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 OGFOD2Q6N063 350 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 HMBOX1Q6NT76 420 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 ZFP1Q6P2D0 407 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 SYCE2Q6PIF2 218 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 ZNF547Q8IVP9 402 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 GPR65Q8IYL9 337 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 DTWD1Q8N5C7 304 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 OR2T12Q8NG77 320 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 C1QTNF3Q9BXJ4 246 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 SLC2A11Q9BYW1 496 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 LTB4R2Q9NPC1 389 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 FBXL12Q9NXK8 326 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 GPSM3Q9Y4H4 160 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 PCDHB14Q9Y5E9 798 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 SCN3AQ9NY46 2000 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 SLC28A1O00337 649 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 RFXANKO14593 260 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 NUAK1O60285 661 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 BRINP1O60477 761 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 MATN4O95460 622 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 SDC1P18827 310 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 GALK1P51570 392 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 CLDN2P57739 230 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 MC1RQ01726 317 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 CCINQ13939 588 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 SLBPQ14493 270 aaKnown RBP eCLIP10.41□□□□□ -0.74
NEDD9-201ENST00000379433 ENPP6Q6UWR7 440 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms