RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 C1orf220Q5T0J3 134 aa17.22■□□□□ 0.35
CNTNAP3-204ENST00000377656 RASSF6Q6ZTQ3 369 aa17.22■□□□□ 0.35
CNTNAP3-204ENST00000377656 RHEBL1Q8TAI7 183 aa17.22■□□□□ 0.35
CNTNAP3-204ENST00000377656 PRAP1Q96NZ9 151 aa17.22■□□□□ 0.35
CNTNAP3-204ENST00000377656 FCRL3Q96P31 734 aaPredicted RBP17.22■□□□□ 0.35
CNTNAP3-204ENST00000377656 ALPK1Q96QP1 1244 aa17.22■□□□□ 0.35
CNTNAP3-204ENST00000377656 A8MU76 341 aa17.22■□□□□ 0.35
CNTNAP3-204ENST00000377656 CAPN5O15484 640 aaPredicted RBP17.22■□□□□ 0.35
CNTNAP3-204ENST00000377656 SMU1Q2TAY7 513 aa17.22■□□□□ 0.35
CNTNAP3-204ENST00000377656 GPRIN1Q7Z2K8 1008 aa17.22■□□□□ 0.35
CNTNAP3-204ENST00000377656 SYVN1Q86TM6 617 aa17.22■□□□□ 0.35
CNTNAP3-204ENST00000377656 GPALPP1Q8IXQ4 340 aa17.22■□□□□ 0.35
CNTNAP3-204ENST00000377656 GALNT15Q8N3T1 639 aa17.22■□□□□ 0.35
CNTNAP3-204ENST00000377656 AQP11Q8NBQ7 271 aa17.22■□□□□ 0.35
CNTNAP3-204ENST00000377656 CD180Q99467 661 aa17.22■□□□□ 0.35
CNTNAP3-204ENST00000377656 C17orf62Q9BQA9 187 aa17.22■□□□□ 0.35
CNTNAP3-204ENST00000377656 LRP6O75581 1613 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 A0A1W2PRG6 482 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 PSMD9O00233 223 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 NUDT6P53370 316 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 CD47Q08722 323 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 REEP3Q6NUK4 255 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 OR10Q1Q8NGQ4 319 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 TBC1D24Q9ULP9 559 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 BAZ2AQ9UIF9 1905 aaKnown RBP17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 SCN11AQ9UI33 1791 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 ALDOAP04075 364 aaKnown RBP17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 SCAPQ12770 1279 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 PON3Q15166 354 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 ZBED5Q49AG3 693 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 FBXO43Q4G163 708 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 OR4K1Q8NGD4 311 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 CYTH4Q9UIA0 394 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 TMA7Q9Y2S6 64 aaKnown RBP17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 TSPAN6O43657 245 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 HNRNPA1P09651 372 aaKnown RBP eCLIP17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 ARMCX6Q7L4S7 300 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 SERTAD3Q9UJW9 196 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 PCDHGA2Q9Y5H1 932 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 MYH8P13535 1937 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 PLGP00747 810 aaPredicted RBP17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 ZNF20P17024 532 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 MATN1P21941 496 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 NOVP48745 357 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 CYBRD1Q53TN4 286 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 LIPJQ5W064 366 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 ARL9Q6T311 187 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 NANOGNBQ7Z5D8 188 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 DENND1AQ8TEH3 1009 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 REEP4Q9H6H4 257 aa17.21■□□□□ 0.35
CNTNAP3-204ENST00000377656 MAFKO60675 156 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 S100A9P06702 114 aaKnown RBP17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 OR3A3P47888 321 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 OR3A2P47893 321 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 CDKN1CP49918 316 aaPredicted RBP17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 TMEM135Q86UB9 458 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 KBTBD6Q86V97 674 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 TRAM1L1Q8N609 369 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 OR4K17Q8NGC6 315 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 C1orf216Q8TAB5 229 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 PHOSPHO1Q8TCT1 267 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 P2RY13Q9BPV8 354 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 PAAF1Q9BRP4 392 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 RC3H2Q9HBD1 1191 aaKnown RBP17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 A0A1W2PRQ8 180 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 STC2O76061 302 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 GSRP00390 522 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 IQCF3P0C7M6 154 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 ACSL1P33121 698 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 TECRLQ5HYJ1 363 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 NOXRED1Q6NXP6 359 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 RNF130Q86XS8 419 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 GTPBP2Q9BX10 602 aaKnown RBP17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 LYARQ9NX58 379 aaKnown RBP17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 LRRC42Q9Y546 428 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 NR2C1P13056 603 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 CD1DP15813 335 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 CDH15P55291 814 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 MEF2AQ02078 507 aaPredicted RBP17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 SLC10A2Q12908 348 aaPredicted RBP17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 SUN3Q8TAQ9 357 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 ADAD1Q96M93 576 aaKnown RBP17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 FIZ1Q96SL8 496 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 TSSK6Q9BXA6 273 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 TTYH1Q9H313 450 aaPredicted RBP17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 ZNF304Q9HCX3 659 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 TM9SF3Q9HD45 589 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 BRD7Q9NPI1 651 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 HRASLS2Q9NWW9 162 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 ZNF142P52746 1687 aaPredicted RBP17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 PRAMEF33A0A0G2JMD5 474 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 TLX2O43763 284 aaPredicted RBP17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 PRAMEF10O60809 474 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 CH25HO95992 272 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 POLR2CP19387 275 aaPredicted RBP17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 OR12D2P58182 307 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 PRRT3Q5FWE3 981 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 FAM43BQ6ZT52 329 aaPredicted RBP17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 MARCH9Q86YJ5 346 aa17.2■□□□□ 0.34
CNTNAP3-204ENST00000377656 ZNF296Q8WUU4 475 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms