RNA–Protein interactions for RNA: ENST00000377078.2

USP11-202, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-202ENST00000377078 PTGFRNQ9P2B2 879 aa16.22■□□□□ 0.19
USP11-202ENST00000377078 SLC22A14Q9Y267 594 aa16.22■□□□□ 0.19
USP11-202ENST00000377078 DOCK10Q96BY6 2186 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 CNTRLQ7Z7A1 2325 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 TCRBV9S1A1TA0A576 114 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 H2AFYO75367 372 aaKnown RBP16.21■□□□□ 0.19
USP11-202ENST00000377078 MYBL2P10244 700 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 ALOX12P18054 663 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 GNAZP19086 355 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 JAK1P23458 1154 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 STX2P32856 288 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 TSFMP43897 325 aaKnown RBP16.21■□□□□ 0.19
USP11-202ENST00000377078 SCTRP47872 440 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 PCOLCEQ15113 449 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 ZXDCQ2QGD7 858 aaPredicted RBP16.21■□□□□ 0.19
USP11-202ENST00000377078 CATSPEREQ5SY80 951 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 NXPE4Q6UWF7 544 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 CEP97Q8IW35 865 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 ZNF740Q8NDX6 193 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 NT5CQ8TCD5 201 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 C19orf60Q96EN9 201 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 CYTH2Q99418 400 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 RBBP8Q99708 897 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 LRRC4CQ9HCJ2 640 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 GRHL1Q9NZI5 618 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 IKZF3Q9UKT9 509 aa16.21■□□□□ 0.19
USP11-202ENST00000377078 ESPL1Q14674 2120 aa16.21■□□□□ 0.18
USP11-202ENST00000377078 JRKO75564 520 aa16.2■□□□□ 0.18
USP11-202ENST00000377078 WDR47O94967 919 aa16.2■□□□□ 0.18
USP11-202ENST00000377078 SPRP35270 261 aaPredicted RBP16.2■□□□□ 0.18
USP11-202ENST00000377078 ATP6V0D1P61421 351 aa16.2■□□□□ 0.18
USP11-202ENST00000377078 REEP5Q00765 189 aa16.2■□□□□ 0.18
USP11-202ENST00000377078 RBBP5Q15291 538 aaKnown RBP16.2■□□□□ 0.18
USP11-202ENST00000377078 NR6A1Q15406 480 aa16.2■□□□□ 0.18
USP11-202ENST00000377078 DEFB134Q4QY38 66 aa16.2■□□□□ 0.18
USP11-202ENST00000377078 ABHD17BQ5VST6 288 aa16.2■□□□□ 0.18
USP11-202ENST00000377078 CPEB2Q7Z5Q1 589 aaKnown RBP16.2■□□□□ 0.18
USP11-202ENST00000377078 PDSS2Q86YH6 399 aa16.2■□□□□ 0.18
USP11-202ENST00000377078 C17orf53Q8N3J3 647 aaPredicted RBP16.2■□□□□ 0.18
USP11-202ENST00000377078 SIRT6Q8N6T7 355 aa16.2■□□□□ 0.18
USP11-202ENST00000377078 TTLQ8NG68 377 aa16.2■□□□□ 0.18
USP11-202ENST00000377078 SUN3Q8TAQ9 357 aa16.2■□□□□ 0.18
USP11-202ENST00000377078 PRR7Q8TB68 274 aa16.2■□□□□ 0.18
USP11-202ENST00000377078 ANKRD49Q8WVL7 239 aa16.2■□□□□ 0.18
USP11-202ENST00000377078 TBC1D20Q96BZ9 403 aa16.2■□□□□ 0.18
USP11-202ENST00000377078 PEX11GQ96HA9 241 aa16.2■□□□□ 0.18
USP11-202ENST00000377078 GPR22Q99680 433 aa16.2■□□□□ 0.18
USP11-202ENST00000377078 MCMBPQ9BTE3 642 aa16.2■□□□□ 0.18
USP11-202ENST00000377078 CLK4Q9HAZ1 481 aaKnown RBP16.2■□□□□ 0.18
USP11-202ENST00000377078 WWOXQ9NZC7 414 aa16.2■□□□□ 0.18
USP11-202ENST00000377078 MTO1Q9Y2Z2 717 aaKnown RBP16.2■□□□□ 0.18
USP11-202ENST00000377078 SHANK1Q9Y566 2161 aa16.2■□□□□ 0.18
USP11-202ENST00000377078 TRAV17A0A0B4J275 112 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 ANKUB1A6NFN9 424 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 ZNF860A6NHJ4 632 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 FAM159BA6NKW6 160 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 PSMD12O00232 456 aaPredicted RBP16.19■□□□□ 0.18
USP11-202ENST00000377078 GALR3O60755 368 aaPredicted RBP16.19■□□□□ 0.18
USP11-202ENST00000377078 PIAS1O75925 651 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 SEC24DO94855 1032 aaPredicted RBP16.19■□□□□ 0.18
USP11-202ENST00000377078 S100BP04271 92 aaPredicted RBP16.19■□□□□ 0.18
USP11-202ENST00000377078 CCDC166P0CW27 439 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 GSTM2P28161 218 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 HPDP32754 393 aaPredicted RBP16.19■□□□□ 0.18
USP11-202ENST00000377078 SOX11P35716 441 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 ACTN3Q08043 901 aaPredicted RBP16.19■□□□□ 0.18
USP11-202ENST00000377078 MRPL49Q13405 166 aaKnown RBP16.19■□□□□ 0.18
USP11-202ENST00000377078 NAB1Q13506 487 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 TGFBIQ15582 683 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 NSDHLQ15738 373 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 EXT1Q16394 746 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 EIF2S3LQ2VIR3 472 aaKnown RBP16.19■□□□□ 0.18
USP11-202ENST00000377078 BTBD16Q32M84 506 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 CDKL4Q5MAI5 379 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 GRTP1Q5TC63 336 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 PLAG1Q6DJT9 500 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 FAM180AQ6UWF9 173 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 ZNF572Q7Z3I7 529 aaPredicted RBP16.19■□□□□ 0.18
USP11-202ENST00000377078 GPSM1Q86YR5 675 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 KRT78Q8N1N4 520 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 AFAP1L2Q8N4X5 818 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 OR1N1Q8NGS0 311 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 FBXO25Q8TCJ0 367 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 RHBDF1Q96CC6 855 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.19■□□□□ 0.18
USP11-202ENST00000377078 CAB39LQ9H9S4 337 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 SMYD2Q9NRG4 433 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 CSAG2Q9Y5P2 127 aa16.19■□□□□ 0.18
USP11-202ENST00000377078 USP9XQ93008 2570 aaPredicted RBP16.19■□□□□ 0.18
USP11-202ENST00000377078 BLACEA4D250 179 aa16.18■□□□□ 0.18
USP11-202ENST00000377078 NCF1BA6NI72 391 aaPredicted RBP16.18■□□□□ 0.18
USP11-202ENST00000377078 NCF1CA8MVU1 366 aaPredicted RBP16.18■□□□□ 0.18
USP11-202ENST00000377078 CXorf49A8MYA2 514 aaPredicted RBP16.18■□□□□ 0.18
USP11-202ENST00000377078 PHGDHO43175 533 aaKnown RBP16.18■□□□□ 0.18
USP11-202ENST00000377078 CBX6O95503 412 aa16.18■□□□□ 0.18
USP11-202ENST00000377078 FHP07954 510 aa16.18■□□□□ 0.18
USP11-202ENST00000377078 SERPINA6P08185 405 aa16.18■□□□□ 0.18
USP11-202ENST00000377078 ZNF888P0CJ79 500 aaPredicted RBP16.18■□□□□ 0.18
USP11-202ENST00000377078 NCF1P14598 390 aaPredicted RBP16.18■□□□□ 0.18
USP11-202ENST00000377078 MAGEA4P43358 317 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms