RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 GDAP1L1Q96MZ0 367 aa1.84□□□□□ -2.12
VPS13A-206ENST00000376646 KLHL5Q96PQ7 755 aa1.84□□□□□ -2.12
VPS13A-206ENST00000376646 NDNQ99608 321 aa1.84□□□□□ -2.12
VPS13A-206ENST00000376646 PANK2Q9BZ23 570 aa1.84□□□□□ -2.12
VPS13A-206ENST00000376646 LSG1Q9H089 658 aaKnown RBP1.84□□□□□ -2.12
VPS13A-206ENST00000376646 ABCB8Q9NUT2 735 aa1.84□□□□□ -2.12
VPS13A-206ENST00000376646 FAM120CQ9NX05 1096 aaKnown RBP1.84□□□□□ -2.12
VPS13A-206ENST00000376646 THEGQ9P2T0 379 aa1.84□□□□□ -2.12
VPS13A-206ENST00000376646 MTRRQ9UBK8 725 aa1.84□□□□□ -2.12
VPS13A-206ENST00000376646 RUVBL2Q9Y230 463 aaKnown RBP1.84□□□□□ -2.12
VPS13A-206ENST00000376646 CHKBQ9Y259 395 aa1.84□□□□□ -2.12
VPS13A-206ENST00000376646 HBS1LQ9Y450 684 aaKnown RBP1.84□□□□□ -2.12
VPS13A-206ENST00000376646 R4GN57 208 aa1.84□□□□□ -2.12
VPS13A-206ENST00000376646 ADAMTS9Q9P2N4 1935 aa1.84□□□□□ -2.12
VPS13A-206ENST00000376646 ACEP12821 1306 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 SMIM30A4D0T7 59 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 F8VVB4 439 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 F8VWA3 439 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 KLF11O14901 512 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 C9P02748 559 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 EEF2P13639 858 aaKnown RBP1.83□□□□□ -2.12
VPS13A-206ENST00000376646 F3P13726 295 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 ATP6V1B1P15313 513 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 CYP2A7P20853 494 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 UGT1A4P22310 534 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 CA6P23280 308 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 RBMS1P29558 406 aaKnown RBP1.83□□□□□ -2.12
VPS13A-206ENST00000376646 SSTR1P30872 391 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 LBX1P52954 281 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 CACNG1Q06432 222 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 ODF2Q5BJF6 829 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 GLRA4Q5JXX5 417 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 SLC10A5Q5PT55 438 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 TRIM65Q6PJ69 517 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 NHLRC1Q6VVB1 395 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 PHLDB2Q86SQ0 1253 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 CDC20BQ86Y33 519 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 CREBRFQ8IUR6 639 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 UNC45BQ8IWX7 931 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 CLYBLQ8N0X4 340 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 KIAA0895Q8NCT3 520 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 OR13C3Q8NGS6 347 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 NCOA7Q8NI08 942 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 AFAP1L1Q8TED9 768 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 FOXN4Q96NZ1 517 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 MAP3K3Q99759 626 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 CACNG6Q9BXT2 260 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 CPVLQ9H3G5 476 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 ACTL8Q9H568 366 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 SRD5A3Q9H8P0 318 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 CHST11Q9NPF2 352 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 SNX5Q9Y5X3 404 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 A0A1W2PR80 420 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 LRRD1A4D1F6 860 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 TRIM64A6NGJ6 449 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 TRIM64BA6NI03 449 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 C17orf105B2RV13 164 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 EPM2AB3EWF7 344 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 KBTBD13C9JR72 458 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 SOCS3O14543 225 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 FPGTO14772 594 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 DFFBO76075 338 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 BAG3O95817 575 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 SLC16A8O95907 504 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 GH1P01241 217 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 SP9P0CG40 484 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 DLATP10515 647 aaKnown RBP1.83□□□□□ -2.12
VPS13A-206ENST00000376646 DUTP33316 252 aaKnown RBP1.83□□□□□ -2.12
VPS13A-206ENST00000376646 SFTPDP35247 375 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 NPBWR1P48145 328 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 PAX9P55771 341 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 HERV-K104P61576 105 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 ASIC1P78348 528 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 MS4A2Q01362 244 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 KBTBD12Q3ZCT8 623 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 GPR33Q49SQ1 333 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 LCE1BQ5T7P3 118 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 FAM46CQ5VWP2 391 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 UGT3A1Q6NUS8 523 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 TMEM207Q6UWW9 146 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 KCTD9Q7L273 389 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 LINC00612Q8N6U2 182 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 C10orf53Q8N6V4 93 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 MGARPQ8TDB4 240 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 SLC26A7Q8TE54 656 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 UBLCP1Q8WVY7 318 aaPredicted RBP1.83□□□□□ -2.12
VPS13A-206ENST00000376646 METTL21AQ8WXB1 218 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 ARHGAP45Q92619 1136 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 KRT35Q92764 455 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 NECTIN4Q96NY8 510 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 ZNF350Q9GZX5 532 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 IARS2Q9NSE4 1012 aaKnown RBP1.83□□□□□ -2.12
VPS13A-206ENST00000376646 DNAJC17Q9NVM6 304 aaKnown RBP1.83□□□□□ -2.12
VPS13A-206ENST00000376646 LEF1Q9UJU2 399 aaPredicted RBP1.83□□□□□ -2.12
VPS13A-206ENST00000376646 FBXL5Q9UKA1 691 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 KLK4Q9Y5K2 254 aa1.83□□□□□ -2.12
VPS13A-206ENST00000376646 A0A1W2PRV1 198 aa1.82□□□□□ -2.12
VPS13A-206ENST00000376646 SDR42E2A6NKP2 422 aa1.82□□□□□ -2.12
VPS13A-206ENST00000376646 TMEM150CB9EJG8 249 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms