RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 MYDGFQ969H8 173 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 TMEM159Q96B96 161 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 DACH2Q96NX9 599 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 NDUFAF4Q9P032 175 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 PSORS1C1Q9UIG5 152 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 TRIM17Q9Y577 477 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 LYVE1Q9Y5Y7 322 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 CXorf51AA0A1B0GTR3 108 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 TEX28O15482 410 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 ZNF30P17039 623 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 GGT2P36268 569 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 TUBA1BP68363 451 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 SYTL3Q4VX76 610 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 CATSPEREQ5SY80 951 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 PLEKHG7Q6ZR37 379 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 TUBA1AQ71U36 451 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 CAMKMTQ7Z624 323 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 RAVER1Q8IY67 606 aaKnown RBP14.01□□□□□ -0.17
MSH5-201ENST00000375703 ZNF282Q9UDV7 671 aaPredicted RBP14.01□□□□□ -0.17
MSH5-201ENST00000375703 AP1M2Q9Y6Q5 423 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 A0A1W2PRU2 124 aa14□□□□□ -0.17
MSH5-201ENST00000375703 ADAMDEC1O15204 470 aa14□□□□□ -0.17
MSH5-201ENST00000375703 RFPL2O75678 378 aa14□□□□□ -0.17
MSH5-201ENST00000375703 OPN1SWP03999 348 aa14□□□□□ -0.17
MSH5-201ENST00000375703 CATP04040 527 aaKnown RBP14□□□□□ -0.17
MSH5-201ENST00000375703 CYP2A6P11509 494 aaPredicted RBP14□□□□□ -0.17
MSH5-201ENST00000375703 TNFRSF1BP20333 461 aa14□□□□□ -0.17
MSH5-201ENST00000375703 CA8P35219 290 aa14□□□□□ -0.17
MSH5-201ENST00000375703 ETV3P41162 512 aa14□□□□□ -0.17
MSH5-201ENST00000375703 PREPP48147 710 aa14□□□□□ -0.17
MSH5-201ENST00000375703 PPIGQ13427 754 aaKnown RBP eCLIP14□□□□□ -0.175e-7■■■■□ 21.7
MSH5-201ENST00000375703 INAVAQ3KP66 663 aa14□□□□□ -0.17
MSH5-201ENST00000375703 PRSS36Q5K4E3 855 aa14□□□□□ -0.17
MSH5-201ENST00000375703 SLC5A8Q8N695 610 aa14□□□□□ -0.17
MSH5-201ENST00000375703 OR52J3Q8NH60 311 aa14□□□□□ -0.17
MSH5-201ENST00000375703 PSMA8Q8TAA3 256 aa14□□□□□ -0.17
MSH5-201ENST00000375703 PSD2Q9BQI7 771 aa14□□□□□ -0.17
MSH5-201ENST00000375703 RIOK2Q9BVS4 552 aaKnown RBP14□□□□□ -0.17
MSH5-201ENST00000375703 RMI1Q9H9A7 625 aa14□□□□□ -0.17
MSH5-201ENST00000375703 ZBTB20Q9HC78 741 aaPredicted RBP14□□□□□ -0.17
MSH5-201ENST00000375703 PLCXD1Q9NUJ7 323 aa14□□□□□ -0.17
MSH5-201ENST00000375703 M0R082 166 aa14□□□□□ -0.17
MSH5-201ENST00000375703 SLC16A8O95907 504 aa14□□□□□ -0.17
MSH5-201ENST00000375703 VIPR1P32241 457 aa14□□□□□ -0.17
MSH5-201ENST00000375703 SLC19A1P41440 591 aa14□□□□□ -0.17
MSH5-201ENST00000375703 OR1E2P47887 323 aa14□□□□□ -0.17
MSH5-201ENST00000375703 RPS13P62277 151 aaKnown RBP14□□□□□ -0.17
MSH5-201ENST00000375703 MAPK11Q15759 364 aa14□□□□□ -0.17
MSH5-201ENST00000375703 TIGD6Q17RP2 521 aa14□□□□□ -0.17
MSH5-201ENST00000375703 SPIN4Q56A73 249 aa14□□□□□ -0.17
MSH5-201ENST00000375703 TMCO2Q7Z6W1 182 aaPredicted RBP14□□□□□ -0.17
MSH5-201ENST00000375703 SLC22A16Q86VW1 577 aa14□□□□□ -0.17
MSH5-201ENST00000375703 TMEM25Q86YD3 366 aa14□□□□□ -0.17
MSH5-201ENST00000375703 LILRA3Q8N6C8 439 aaPredicted RBP14□□□□□ -0.17
MSH5-201ENST00000375703 GGHQ92820 318 aa14□□□□□ -0.17
MSH5-201ENST00000375703 ANKHQ9HCJ1 492 aa14□□□□□ -0.17
MSH5-201ENST00000375703 SPASTQ9UBP0 616 aa14□□□□□ -0.17
MSH5-201ENST00000375703 CLCA1A8K7I4 914 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 RNASET2O00584 256 aaKnown RBP13.99□□□□□ -0.17
MSH5-201ENST00000375703 NRG2O14511 850 aaPredicted RBP13.99□□□□□ -0.17
MSH5-201ENST00000375703 TSPAN6O43657 245 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 HLA-EP13747 358 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 ETFAP13804 333 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 UGT2B10P36537 528 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 RECQLP46063 649 aaPredicted RBP13.99□□□□□ -0.17
MSH5-201ENST00000375703 BDKRB1P46663 353 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 IDH2P48735 452 aaKnown RBP13.99□□□□□ -0.17
MSH5-201ENST00000375703 ZNF404Q494X3 552 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 COX20Q5RI15 118 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 AGAP7PQ5VUJ5 663 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 MLIPQ5VWP3 458 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 BRAT1Q6PJG6 821 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 OR10G2Q8NGC3 310 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 OR4K1Q8NGD4 311 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 OR2A12Q8NGT7 310 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 MYLIPQ8WY64 445 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 TIFAQ96CG3 184 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 PKP4Q99569 1192 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 YIPF2Q9BWQ6 316 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 SLC46A2Q9BY10 475 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 MMP27Q9H306 513 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 POLE4Q9NR33 117 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 SCN5AQ14524 2016 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 FADS2P1A8MWK0 482 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 AOC2O75106 756 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 CNOT3O75175 753 aaKnown RBP13.99□□□□□ -0.17
MSH5-201ENST00000375703 CDK1P06493 297 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 ANXA8P13928 327 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 GADD45AP24522 165 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 IMPA1P29218 277 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 TIA1P31483 386 aaKnown RBP eCLIP13.99□□□□□ -0.171e-6■■■■□ 19.4
MSH5-201ENST00000375703 CTSKP43235 329 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 ZNF852Q6ZMS4 543 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 ZNF605Q86T29 641 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 DDX53Q86TM3 631 aaKnown RBP13.99□□□□□ -0.17
MSH5-201ENST00000375703 DNAJC22Q8N4W6 341 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 OR56A3Q8NH54 315 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 RLIMQ9NVW2 624 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 GPATCH2Q9NW75 528 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 SPG21Q9NZD8 308 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms