RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 ISCA2Q86U28 154 aa11.57□□□□□ -0.56
LSM2-208ENST00000375661 PARP9Q8IXQ6 854 aa11.57□□□□□ -0.56
LSM2-208ENST00000375661 LRRC56Q8IYG6 542 aaPredicted RBP11.57□□□□□ -0.56
LSM2-208ENST00000375661 C2orf73Q8N5S3 287 aaPredicted RBP11.57□□□□□ -0.56
LSM2-208ENST00000375661 OR2L8Q8NGY9 312 aa11.57□□□□□ -0.56
LSM2-208ENST00000375661 HMGCLL1Q8TB92 370 aa11.57□□□□□ -0.56
LSM2-208ENST00000375661 MCOLN3Q8TDD5 553 aa11.57□□□□□ -0.56
LSM2-208ENST00000375661 ZNF480Q8WV37 535 aa11.57□□□□□ -0.56
LSM2-208ENST00000375661 SLC22A18Q96BI1 424 aa11.57□□□□□ -0.56
LSM2-208ENST00000375661 THOC3Q96J01 351 aaKnown RBP11.57□□□□□ -0.56
LSM2-208ENST00000375661 TMEM109Q9BVC6 243 aa11.57□□□□□ -0.56
LSM2-208ENST00000375661 ROPN1BQ9BZX4 212 aaPredicted RBP11.57□□□□□ -0.56
LSM2-208ENST00000375661 VPS11Q9H270 941 aa11.57□□□□□ -0.56
LSM2-208ENST00000375661 ROPN1Q9HAT0 212 aaPredicted RBP11.57□□□□□ -0.56
LSM2-208ENST00000375661 CHST11Q9NPF2 352 aa11.57□□□□□ -0.56
LSM2-208ENST00000375661 INTS7Q9NVH2 962 aaKnown RBP11.57□□□□□ -0.56
LSM2-208ENST00000375661 ZNF358Q9NW07 568 aa11.57□□□□□ -0.56
LSM2-208ENST00000375661 SUCOQ9UBS9 1254 aaKnown RBP11.57□□□□□ -0.56
LSM2-208ENST00000375661 ANKRD17O75179 2603 aaKnown RBP11.57□□□□□ -0.56
LSM2-208ENST00000375661 VSTM2BA6NLU5 285 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 PRICKLE3O43900 615 aaPredicted RBP11.56□□□□□ -0.56
LSM2-208ENST00000375661 CDH16O75309 829 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 FKBP9O95302 570 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 SLC16A8O95907 504 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 SYF2O95926 243 aaKnown RBP11.56□□□□□ -0.56
LSM2-208ENST00000375661 HPP00738 406 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 ENO2P09104 434 aaPredicted RBP11.56□□□□□ -0.56
LSM2-208ENST00000375661 IMPA1P29218 277 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 TDGF1P3P51864 188 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 ZNF844Q08AG5 666 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 IFFO1Q0D2I5 559 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 GRM7Q14831 915 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 ARHGAP19Q14CB8 494 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 RBBP7Q16576 425 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.56□□□□□ -0.56
LSM2-208ENST00000375661 OTOGQ6ZRI0 2925 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 COX15Q7KZN9 410 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 ADAMTSL2Q86TH1 951 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 MCATQ8IVS2 390 aaKnown RBP11.56□□□□□ -0.56
LSM2-208ENST00000375661 OR11G2Q8NGC1 345 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 ITLN2Q8WWU7 325 aaPredicted RBP11.56□□□□□ -0.56
LSM2-208ENST00000375661 KIAA1191Q96A73 305 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 CCDC138Q96M89 665 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 ZIM3Q96PE6 472 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 RAB11FIP5Q9BXF6 653 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 NMRAL1Q9HBL8 299 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 CUTCQ9NTM9 273 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 UTP6Q9NYH9 597 aaKnown RBP11.56□□□□□ -0.56
LSM2-208ENST00000375661 STOX2Q9P2F5 926 aaPredicted RBP11.56□□□□□ -0.56
LSM2-208ENST00000375661 LGALS13Q9UHV8 139 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 OARD1Q9Y530 152 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 CSMD1Q96PZ7 3565 aa11.56□□□□□ -0.56
LSM2-208ENST00000375661 TRAV17A0A0B4J275 112 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 A0A1W2PPV9 198 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 FITM1A5D6W6 292 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 E7ENX8 843 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 ALOX12BO75342 701 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 GUCA1CO95843 209 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 HIST1H2AGP0C0S8 130 aaPredicted RBP11.55□□□□□ -0.56
LSM2-208ENST00000375661 ATXN8OSP0DMR3 200 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 COL6A2P12110 1019 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 H2AFXP16104 143 aaPredicted RBP11.55□□□□□ -0.56
LSM2-208ENST00000375661 TFEBP19484 476 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 HIST1H2ADP20671 130 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 MAGP20916 626 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 HSD17B2P37059 387 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 PNLIPRP1P54315 467 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 AP1S2P56377 157 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 TAP2Q03519 686 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 FAM214AQ32MH5 1076 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 RPTNQ6XPR3 784 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 BNC2Q6ZN30 1099 aaPredicted RBP11.55□□□□□ -0.56
LSM2-208ENST00000375661 TAX1BP1Q86VP1 789 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 TMEM151BQ8IW70 566 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 CNPY4Q8N129 248 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 RIBC1Q8N443 379 aaPredicted RBP11.55□□□□□ -0.56
LSM2-208ENST00000375661 ZNF808Q8N4W9 903 aaPredicted RBP11.55□□□□□ -0.56
LSM2-208ENST00000375661 RAB42Q8N4Z0 105 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 TTC29Q8NA56 475 aaPredicted RBP11.55□□□□□ -0.56
LSM2-208ENST00000375661 PPFIBP2Q8ND30 876 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 NR4A3Q92570 626 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 CABS1Q96KC9 395 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 HIST1H2AHQ96KK5 128 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 ZNF285Q96NJ3 590 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 ATOH8Q96SQ7 321 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 HIST1H2AJQ99878 128 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 H2AFJQ9BTM1 129 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 ALG9Q9H6U8 611 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 ARL15Q9NXU5 204 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 C2CD3Q4AC94 2353 aa11.55□□□□□ -0.56
LSM2-208ENST00000375661 FBN2P35556 2912 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 PDZD2O15018 2839 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 DYTNA2CJ06 578 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 TARM1B6A8C7 271 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 GOLGA8RI6L899 631 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 MAP2K7O14733 419 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 SRPX2O60687 465 aaPredicted RBP11.54□□□□□ -0.56
LSM2-208ENST00000375661 PYGBP11216 843 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 KRT15P19012 456 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 YBX1P67809 324 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms