RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 EDN1P05305 212 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 TFAP2AP05549 437 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 GKP32189 559 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 HSD17B2P37059 387 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 SP140Q13342 867 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 CCDC157Q569K6 752 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 KANK2Q63ZY3 851 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 ZNF613Q6PF04 617 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 ENPP6Q6UWR7 440 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 Q6ZVL8 140 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 ARMCX6Q7L4S7 300 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 ABHD11Q8NFV4 315 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 FUBP1Q96AE4 644 aaKnown RBP11.17□□□□□ -0.62
PTCH1-203ENST00000375274 TMED9Q9BVK6 235 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 IRF2BPLQ9H1B7 796 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 FARSBQ9NSD9 589 aaKnown RBP11.17□□□□□ -0.62
PTCH1-203ENST00000375274 TMEM181Q9P2C4 612 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 TAC3Q9UHF0 121 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 PCTPQ9UKL6 214 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 MGAT4BQ9UQ53 548 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 PCDHGA4Q9Y5G9 962 aa11.17□□□□□ -0.62
PTCH1-203ENST00000375274 ERI3O43414 337 aaKnown RBP11.16□□□□□ -0.62
PTCH1-203ENST00000375274 PFKMP08237 780 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 GGT1P19440 569 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 SLITRK4Q8IW52 837 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 RBM12BQ8IXT5 1001 aaKnown RBP11.16□□□□□ -0.62
PTCH1-203ENST00000375274 TOMM5Q8N4H5 51 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 C1orf216Q8TAB5 229 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 C17orf50Q8WW18 174 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 NCSTNQ92542 709 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 PIGKQ92643 395 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 TFAP2CQ92754 450 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 DOHHQ9BU89 302 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 PIGUQ9H490 435 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 MRPS30Q9NP92 439 aaKnown RBP11.16□□□□□ -0.62
PTCH1-203ENST00000375274 MTMR10Q9NXD2 777 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 RIMS3Q9UJD0 308 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 MRTO4Q9UKD2 239 aaKnown RBP11.16□□□□□ -0.62
PTCH1-203ENST00000375274 PHF24Q9UPV7 400 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 OARD1Q9Y530 152 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 MYH1P12882 1939 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 MYH4Q9Y623 1939 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 ANXA2P2A6NMY6 339 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 PDYNP01213 254 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 ANXA2P07355 339 aaKnown RBP11.16□□□□□ -0.62
PTCH1-203ENST00000375274 CDK4P11802 303 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 GJA1P17302 382 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 PRKCZQ05513 592 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 PUDPQ08623 228 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 PAGE3Q5JUK9 113 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 CCBE1Q6UXH8 406 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-203ENST00000375274 TFGQ92734 400 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-203ENST00000375274 PGAP3Q96FM1 320 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-203ENST00000375274 PAAF1Q9BRP4 392 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 TSSK6Q9BXA6 273 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 REEP4Q9H6H4 257 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 ELAC1Q9H777 363 aaKnown RBP11.16□□□□□ -0.62
PTCH1-203ENST00000375274 WDR6Q9NNW5 1121 aaKnown RBP11.16□□□□□ -0.62
PTCH1-203ENST00000375274 MARK1Q9P0L2 795 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 ZNF879B4DU55 563 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 H3BMQ9 156 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 ZNF701M0R085 212 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-203ENST00000375274 CLDN4O14493 209 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 SCAMP1O15126 338 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 SOCS5O75159 536 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 ENTPD6O75354 484 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 VIPR1P32241 457 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 CLDN8P56748 225 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 GHRHRQ02643 423 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 ST3GAL3Q11203 375 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 ZSWIM9Q86XI8 627 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 GHDCQ8N2G8 530 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 DTWD1Q8N5C7 304 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 ZNF366Q8N895 744 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 ZNF461Q8TAF7 563 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 SMPDL3AQ92484 453 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 RAB8BQ92930 207 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 NUS1Q96E22 293 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 RNF31Q96EP0 1072 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 SCLYQ96I15 445 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 COG8Q96MW5 612 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 WACQ9BTA9 647 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 LHPPQ9H008 270 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 RNF38Q9H0F5 515 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 SPEF1Q9Y4P9 236 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 MYO10Q9HD67 2058 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 PTGESO14684 152 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 APODP05090 189 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 PREPP48147 710 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 SLC11A1P49279 550 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 NCS1P62166 190 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 SLC13A2Q13183 592 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 ADAM15Q13444 863 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 PRPF38BQ5VTL8 546 aaKnown RBP11.16□□□□□ -0.62
PTCH1-203ENST00000375274 C22orf39Q6P5X5 142 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 ZNF280BQ86YH2 543 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 SLC37A3Q8NCC5 494 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 PTERQ96BW5 349 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 ZSWIM3Q96MP5 696 aa11.16□□□□□ -0.62
PTCH1-203ENST00000375274 TBC1D24Q9ULP9 559 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 265.7 ms