RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ELMO1Q92556 727 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 UTP4Q969X6 686 aaKnown RBP8.7□□□□□ -1.02
UBR4-201ENST00000375218 KRT12Q99456 494 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 NELFAQ9H3P2 528 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 POLD4Q9HCU8 107 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 PSMD13Q9UNM6 376 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 HYOU1Q9Y4L1 999 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 TRIP12Q14669 1992 aaPredicted RBP8.7□□□□□ -1.02
UBR4-201ENST00000375218 ESYT2A0FGR8 921 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 TUBAL3A6NHL2 446 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 LRRN3E7EW58 273 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 SLC22A2O15244 555 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 VPS26AO75436 327 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 RBMXL2O75526 392 aaKnown RBP8.7□□□□□ -1.02
UBR4-201ENST00000375218 WDR47O94967 919 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 APOL3O95236 402 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 ITGB5P18084 799 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 IL12BP29460 328 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 HNRNPH3P31942 346 aaKnown RBP8.7□□□□□ -1.02
UBR4-201ENST00000375218 JAM2P57087 298 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 ARL6IP1Q15041 203 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 LRRC14Q15048 493 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 PON3Q15166 354 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 WSCD1Q658N2 575 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 CRTC3Q6UUV7 619 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 C19orf35Q6ZS72 473 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 NUDT10Q8NFP7 164 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 CD101Q93033 1021 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 REPS1Q96D71 796 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 ZNF333Q96JL9 665 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 CTRCQ99895 268 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 PHF7Q9BWX1 381 aaPredicted RBP8.7□□□□□ -1.02
UBR4-201ENST00000375218 LRRN3Q9H3W5 708 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 S100A14Q9HCY8 104 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 ERAP1Q9NZ08 941 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 CDYLQ9Y232 598 aa8.7□□□□□ -1.02
UBR4-201ENST00000375218 CNTNAP2Q9UHC6 1331 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 NFIBO00712 420 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 TEX33O43247 280 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 KRT36O76013 467 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 CELF2O95319 508 aaKnown RBP8.69□□□□□ -1.02
UBR4-201ENST00000375218 PGK2P07205 417 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 ELFN1P0C7U0 828 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 PIM1P11309 404 aaPredicted RBP8.69□□□□□ -1.02
UBR4-201ENST00000375218 RPL10AP62906 217 aaKnown RBP8.69□□□□□ -1.02
UBR4-201ENST00000375218 DPY19L1Q2PZI1 675 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 COQ5Q5HYK3 327 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 MBNL2Q5VZF2 373 aaKnown RBP8.69□□□□□ -1.02
UBR4-201ENST00000375218 CPZQ66K79 652 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 GPBAR1Q8TDU6 330 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 ELP4Q96EB1 424 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 WDR83Q9BRX9 315 aaKnown RBP8.69□□□□□ -1.02
UBR4-201ENST00000375218 MCMBPQ9BTE3 642 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 SCAND2PQ9GZW5 306 aaPredicted RBP8.69□□□□□ -1.02
UBR4-201ENST00000375218 THAP2Q9H0W7 228 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 ENTPD7Q9NQZ7 604 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 MBNL1Q9NR56 388 aaKnown RBP8.69□□□□□ -1.02
UBR4-201ENST00000375218 SAMSN1Q9NSI8 373 aaKnown RBP8.69□□□□□ -1.02
UBR4-201ENST00000375218 ERRFI1Q9UJM3 462 aaPredicted RBP8.69□□□□□ -1.02
UBR4-201ENST00000375218 A0A0A6YYK5 440 aaPredicted RBP8.69□□□□□ -1.02
UBR4-201ENST00000375218 STX11O75558 287 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 MOCS3O95396 460 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 TTLL1O95922 423 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 ADRA2CP18825 462 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 CD27P26842 260 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 EIF2S3P41091 472 aaKnown RBP8.69□□□□□ -1.02
UBR4-201ENST00000375218 IDH3AP50213 366 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 SLC16A1P53985 500 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 HAUS6Q7Z4H7 955 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 ADHFE1Q8IWW8 467 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 THEM5Q8N1Q8 247 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 ZDHHC1Q8WTX9 485 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 PLK3Q9H4B4 646 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 TIGARQ9NQ88 270 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 PARPBPQ9NWS1 579 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 NAGKQ9UJ70 344 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 FBXL3Q9UKT7 428 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 GDAQ9Y2T3 454 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 MFHAS1Q9Y4C4 1052 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 PCDHB1Q9Y5F3 818 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 LIPGQ9Y5X9 500 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 A0A087WZ62 844 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 NPHP3-ACAD11A0A0J9YXS1 232 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 TMEM150BA6NC51 233 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 TOX3O15405 576 aaPredicted RBP8.69□□□□□ -1.02
UBR4-201ENST00000375218 ADCY6O43306 1168 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 ADAM23O75077 832 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 UNC5CO95185 931 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 ITGA5P08648 1049 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 FCER1AP12319 257 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 B4GALT1P15291 398 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 EFNA1P20827 205 aaPredicted RBP8.69□□□□□ -1.02
UBR4-201ENST00000375218 MSX1P28360 303 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 TREML2Q5T2D2 321 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 BLIDQ8IZY5 108 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 GHDCQ8N2G8 530 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 FAM89BQ8N5H3 189 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 BLOC1S5Q8TDH9 187 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 TBCKQ8TEA7 893 aa8.69□□□□□ -1.02
UBR4-201ENST00000375218 AGAP11Q8TF27 550 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms